Panicum virgatum (switchgrass): 120682267
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Entry
120682267 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 2-like isoform X1
KO
K03349
anaphase-promoting complex subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120682267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120682267
03036 Chromosome and associated proteins [BR:
pvir03036
]
120682267
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Cullin
120682267
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120682267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
ANAPC2
CFAP300
Motif
Other DBs
NCBI-GeneID:
120682267
NCBI-ProteinID:
XP_039820025
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Position
7N:34716869..34723344
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AA seq
860 aa
AA seq
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MERDDADGSLDSWAQFCSLSNELLGGDGDLSAGPRLAPVVADLCTRGLATLVRDYFLHSL
EETFRNNAVKKFWQHFHPYCSASAVDRMKFCVKEHWPDEILSRALEDICLEKSYQEKCVF
VLVHALQSYEDRTAKRKLKAVDCSSSLMPRYQLMVSSVLLTTLPLSFPEILNVYFKKKLE
ELNVIMAGSYESDQLGNHEPFESNNASDWHCGMDIDGQEVSESSFLVKNIGKVVRDLRCL
GFTSVTEDAYSSAIIWLLKSKVYELAGDDYRVPVLRCVKKWIQAVPLQFLHALLTYLGDS
VDYDSGSSGLKSPLASRPSSFPGIGVPSEALVRWHMRLEYFAYETLQDLRIGKLFEIIVD
YPESSPAIEDLKLCLEYTGQHSKLVDSFISSLKYRLLTAGASTNDILHQYVSTIKALRTI
DPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGSGGNASGTGNAGDNLLEELNRDAET
QENADYDNHANVDEKQAWLNSESWEPDPVEADPLKGSRNRRKVDILGLMVSIIGSKDQLV
NEYRVMLAEKLLNKADFEIDSDIRTLELLKIHFGESSMQKCEIMLNDLIDSKRTNSNIKT
SLLKTSQTVPGKEEAEISHDILDATIISSNFWPPIQTEDLVVPASVDQLLSDYAKRFHQI
KTPRKLLWKKNLGTVKLELEFEGRSMQFTVAPVHAAIIMHFQEKSSWTSKTLATEIGIPM
DSLNRRISFWTSKGILTESAGPDADDHTFTVVDSMSDVNKNSIANERLAEYQMTEEEGES
SVASVEEQLKKEMTVYEKFIIGMLTNFGSMSLDRIHNTLKMFCIAEPSYDKSLQQLQSFL
SGLVADEKLEMRDGLYLLKR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggacgacgccgacggcagtctcgattcgtgggcccaattctgctctctctcc
aacgaacttcttggcggcgatggtgatctctccgcagggccgcgcctagcgcccgtcgtc
gccgacctctgcacccgcggcctcgccacgctcgtccgcgactactttctccactccctc
gaggaaacatttcgaaacaatgcagtcaagaagttctggcagcactttcatccttattgc
agtgcctctgcagtagatcgaatgaagttctgtgttaaagaacattggcccgatgaaatc
ttaagtagagcactggaggacatatgcttggaaaagagttaccaggaaaaatgtgttttt
gttctagtccatgctttacaatcatacgaggatagaacagccaaaagaaaattaaaagca
gtggattgcagttccagcttaatgcctaggtaccaattaatggtatcatcagtacttctg
acaacactgcccttgagctttcctgagatattaaatgtctatttcaagaagaagctggaa
gaacttaatgttattatggctggatcttatgagagtgaccaacttgggaatcatgaacct
tttgaaagtaataatgcctctgactggcattgtggaatggatattgatggtcaagaagtt
tcagaaagtagcttcttggtaaagaacattggaaaagttgttcgtgatcttagatgtctt
ggttttacatcagtgactgaagatgcttattcctctgcaataatctggcttttaaagtct
aaagtttatgaactagctggtgatgattatagagttcctgtccttaggtgtgtgaagaag
tggattcaggctgttcctcttcaatttctgcatgctcttttaacatatcttggcgactcg
gtggactatgatagtggatcttctggtctaaaatcaccattagcctcacgtccttcttct
ttcccagggatcggcgttccttctgaagcccttgtgcgatggcacatgcggcttgagtat
tttgcttatgaaaccttgcaggacctacgaattggcaaactttttgaaataattgtagat
taccctgagagctctcccgctattgaagacctaaagctgtgtttggagtacacgggccaa
cactctaagcttgttgactcatttatctcgtcacttaaatatcgtctacttactgctggt
gcatcaacaaatgatatattgcaccaatacgtgtccactatcaaggcattgcggacaatt
gaccccactggcgtgttcttggaggcagttggtgaaccaattagggattatctgagaggt
agaaaagacacaatcaaatgcatagtgacaatgctaactgatgggtctggaggaaatgca
agtggaacaggaaatgcaggtgacaatcttctggaagagttgaacagagatgctgaaacc
caggaaaatgctgattatgataatcatgcaaacgttgatgagaaacaagcatggctaaat
tctgaaagctgggaacctgatcctgtagaagcagacccattgaaaggcagcaggaataga
aggaaagttgatatacttggactaatggttagtataattggctcaaaggatcaactagtc
aacgaatatcgtgtaatgttggcagaaaagctgctcaacaaagctgactttgaaatagat
tcagacattcgcacgttggaactcctgaagattcattttggtgagagcagcatgcagaag
tgtgagattatgcttaatgacttgattgactcaaagagaaccaactcgaacattaaaaca
tctttgctaaagacatctcaaactgttcctgggaaagaggaggcagaaatatctcatgat
attcttgatgcaacaataatatcgtccaacttttggccaccaattcagacagaagatctt
gttgttcctgcttcagttgatcagttgctatctgattatgcaaaaagatttcatcagata
aaaactccacggaagctattatggaagaaaaatcttggaacagtcaagttagaactggaa
tttgagggaagaagcatgcagtttactgtggctcctgttcatgctgcgatcataatgcat
tttcaagagaaatctagttggacttcgaagacacttgctacggaaattggcatacctatg
gattctcttaacagaaggataagcttctggacaagcaaggggatcctgacagaatcagca
ggaccagatgctgatgatcacacctttactgttgttgatagcatgtctgatgtcaacaag
aacagtattgcgaatgaacgcttggcagagtatcaaatgactgaggaggaaggtgaaagc
tctgtggcttcagttgaggagcaacttaagaaagaaatgactgtgtacgagaaattcatc
attggaatgctaaccaattttgggagtatgtcactcgacaggatacataacactttaaag
atgttctgtatagcggaaccatcatatgacaagtcactgcagcagctgcaaagttttctt
tctggtttagtagcggatgaaaagctagaaatgagggatgggttgtacttgctaaagagg
tag
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