Panicum virgatum (switchgrass): 120682324
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Entry
120682324 CDS
T07260
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
KO
K07151
dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:
2.4.99.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Module
pvir_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120682324
00513 Various types of N-glycan biosynthesis
120682324
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120682324
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120682324
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.18 dolichyl-diphosphooligosaccharide---protein glycotransferase
120682324
Glycosyltransferases [BR:
pvir01003
]
N-Glycan biosynthesis
N-linked oligosaccharide
120682324
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STT3
STT3-PglB_core
AglB_core-like
DUF6358
DUF6798
Motif
Other DBs
NCBI-GeneID:
120682324
NCBI-ProteinID:
XP_039820101
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Position
7N:complement(49655358..49660629)
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AA seq
720 aa
AA seq
DB search
MATTALDFLPAPLRSLRLKTKQQELLLRVSALALIYVLAFAVRLFSVLRYESMIHEFDPY
FNYRTTLFLSENGFSEFWNWFDSESWYPLGRVVGGTLFPGLMVTAALLHRLLRALSLAVH
IREVCVLTAPFFAANTTLVAYAFGREIWDSGAGLVAAALIAIVPGYISRSVAGSYDNEGV
AIFALLLTFYLFVRAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGR
YSQRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKYLLN
DARLFKSFLQITLTCVITVGALALGIGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVS
EHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVA
APAVCLISAIAASATIKNLTTLIRTKSKSPQATSGKTTGSKAAAKGAVDQSLPFQHNAAI
ALLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGHNGGRVIFDDYREAYYWLRQNTPP
DAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMQSLDVNYV
LVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYK
LCYYRFGELTTEYGKPPGYDRVRGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPPKNRS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccgcgctggacttcctcccggcgccgctccggtcgctgcggctcaagacg
aagcagcaggagctcttgctccgcgtctctgcgctggcgctcatctacgtgctcgccttc
gccgtccgcctcttctccgtcctccgctacgagtccatgatccacgagtttgacccctac
ttcaactaccgcaccacgctcttcctctccgagaatggcttcagcgagttctggaactgg
ttcgactccgagagctggtacccgctcggacgcgtcgtgggcggaacactcttcccgggc
ctcatggtcaccgcggcgctgctccaccgcctcctccgcgcgctctccctcgccgtccac
atccgcgaggtctgcgtcctcaccgcgcccttcttcgccgccaacaccacgctcgtcgcc
tacgccttcggccgcgagatctgggactccggggcggggctcgtcgccgccgcgctcatc
gccatcgtcccggggtacatctcccggtccgtagccggttcctacgacaacgaaggcgtc
gccatcttcgcgctgctgctcacattctacctcttcgtgcgcgccgtcaacaccggatca
ctcgcctgggcgcttgcctcggcgtttgggtacttctacatggtgtcggcatggggaggc
tacgtgttcattatcaatctcgtcccgctttatgtgctcgtgctgcttgtcactgggagg
tactcgcagagactctatgtggcctacaattgcatgtatgtgcttgggatgctgcttgcg
atgcagatccgcttcgttgggttccagcatgtgcagtctggggagcacatggccgctatg
ggagtcttcttcctgttgcaggttttcttcttcttggattgggtgaaatacttgctgaat
gatgccagactattcaagtcattccttcaaattactcttacatgtgtgattactgttgga
gccttggctcttggaattggtactgcatctggttacatctccccttggacggggcggttt
tactcccttcttgatcctacctatgcaaaggaccatataccaatcattgcgtctgtctct
gaacatcagccaacagcatggtcatcattcatgttcgatttccacatcctccttttcctg
tttccagctggcctctatttctgtttcaagcgcctgtcagatgccacgatatttattgtt
atgtatggcctcacgagtatgtactttgctggagtgatggttcgattaattctagtggca
gcaccagctgtttgccttatcagtgccattgctgcatctgctacaattaaaaatcttacc
accttgatccgcacaaagagcaaaagtccccaggctacttctggaaaaacaactggctca
aaggcagctgcaaagggtgcagttgaccaatctttgccattccaacataacgcagctatt
gctcttcttctgggtgccttttacttgctcagtaggtatgccatacactgcacttgggtg
acatctgaggcttattcttctccatctatagttttggctgcaaggggtcataatggtgga
agagtcatctttgatgattatcgtgaggcatattattggcttcgtcagaacactcctcct
gatgccaagattatgtcttggtgggactatgggtaccaaattacagccatgggtaacaga
actgttatcgttgacaacaacacatggaataacacacacatagctactgttgggcgtgca
atgtcttcttatgaagatgaagcatatgagattatgcagtcactggatgtgaattatgtg
cttgttgtatttggaggtgttactggctattcttcagatgacattaataagttcttatgg
atggtgcgtattgggggaggtgtttttcctgtaatcaaagagcctgattaccttgttaat
ggggaatatcgggttgataagggtgcagcaccaaaaatgttaaactgcctaatgtacaag
ctttgttactaccgatttggagaacttaccaccgaatatggaaaacctccaggatatgat
cgtgtgcgaggagtggagattggcaacaaagatataaagcttgaatacttggaagaggca
tttacaacttcaaactggatagtgcgcatatacaaggtcaaacccccgaagaacaggtcc
tga
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