Panicum virgatum (switchgrass): 120682343
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Entry
120682343 CDS
T07260
Name
(RefSeq) protein disulfide isomerase-like 5-2
KO
K09580
protein disulfide-isomerase A1 [EC:
5.3.4.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120682343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120682343
04131 Membrane trafficking [BR:
pvir04131
]
120682343
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120682343
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.4 Transposing S-S bonds
5.3.4.1 protein disulfide-isomerase
120682343
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Protein disulfide isomerase
120682343
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
PDI family proteins
120682343
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
120682343
Exosomal proteins of colorectal cancer cells
120682343
Exosomal proteins of bladder cancer cells
120682343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
Thioredoxin_6
Thioredoxin_2
Thioredoxin_8
Calsequestrin
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
120682343
NCBI-ProteinID:
XP_039820123
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Position
7N:complement(29910453..29913164)
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AA seq
419 aa
AA seq
DB search
MATRVLPPTLLPLLLLLLLLPLSARATAAAGEEFPRDGRVIDLDESNFEAALGAIDFLFV
DFYAPWCGHCKRLAPELDEAAPVLAGLSEPIVVAKVNADKYRKLGSKYGVDGFPTLMLFI
HGVPIEHTGSRKADQLVRNLKKFVAPDVSILESDTAIKNFVENAGTSFPMFLGFGVNESL
IAEYGRKYKKRAWFAVAKDFSEDIMVAYDFDKVPALVAIHPKYREQSLFYGPFEGNFLED
FVRQSLLPLVVPINTETLKMLNDDERKVVLIILEDDSDENSTQLVQVLKSAANANRDLVF
GYVGIKQWDEFVETFDVSKSSQLPKLLVWDRNEEYELVDGSERLEEGDHASQISQFLEGY
RAGRTTKKKVSGPSFMGFLNSLVSMNSLYILIFVIALLVVMVYFAGQDDTPQPRRVHEE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgagtcctgccgccgacgctgcttcctctcctcctcctcctcctgctgctc
ccgctctcagcccgcgccaccgccgccgcgggcgaggagttcccgcgcgatgggcgggtg
atcgacctggacgagagcaacttcgaggcagcccttggcgccatcgacttcctcttcgtc
gacttctacgccccgtggtgcggccactgcaagcgcctcgcgcccgagttagatgaagct
gcgccagtgttggcagggttgagtgagcccatcgtagttgccaaagtaaacgctgacaaa
tacaggaaacttggatcaaaatatggagtagatgggttccctaccctgatgctttttatc
cacggtgtcccaattgaacacactggttcaaggaaagctgaccagcttgtccgcaatctg
aagaagtttgttgcgccagatgtttctatccttgagtcagacactgcgataaagaacttt
gttgagaatgctggtacaagctttcctatgttccttggttttggggtgaatgagtcgctg
attgctgagtatggaaggaaatacaagaaaagagcttggtttgctgttgcaaaagatttc
tccgaggacatcatggtggcctatgattttgataaggttccagcactagttgcaatacat
ccgaagtatagggaacaaagtttattctacggcccatttgaaggaaatttcttggaagat
tttgtacgacaatccctgctccctttggttgtcccaatcaatacagagacactaaaaatg
ctgaatgatgatgagaggaaagttgttcttataattttagaggatgattcagatgaaaat
tctacacaactggtacaagtcttgaaatctgctgctaatgcgaaccgtgatttggtgttt
ggatatgttggaatcaagcaatgggatgagtttgtggagacttttgacgtttccaagagc
tcacagctgccaaagttgctggtgtgggatagaaacgaggagtatgagctagtggatggt
tcagagagattagaagaaggtgaccatgcatcccaaataagccaattcctggagggatac
agagcaggaagaaccacaaagaagaaagtcagtggtccttctttcatgggtttcctgaat
tctctggtcagcatgaattcgctgtacatccttatatttgtcattgcccttctggttgtc
atggtgtactttgctgggcaagatgatactcctcagccaagacgagttcatgaagagtga
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