KEGG   Panicum virgatum (switchgrass): 120682405
Entry
120682405         CDS       T07260                                 
Name
(RefSeq) transcription factor HY5-like
  KO
K16241  transcription factor HY5
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120682405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pvir03000]
    120682405
Transcription factors [BR:pvir03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    120682405
SSDB
Motif
Pfam: bZIP_1 bZIP_2 GIT_CC bZIP_Maf GAS WHD_MCM2 TSC22 FmiP_Thoc5 Aminopep CENPH SRC-1 LMBR1
Other DBs
NCBI-GeneID: 120682405
NCBI-ProteinID: XP_039820268
LinkDB
Position
1K:complement(8912952..8915898)
AA seq 169 aa
MQEQAASSRPSRSSSERSSSSAHHIDMEVKEGMESDEEIRRVPELGLELPGGASTSGREA
GAGAGGPERAQSSTAQASSRRRVRSPADKEHKRLKRLLRNRVSAQQARERKKAYLTDLEV
KVKDLEKNNSEMEEKLSTLQNENQMLRQILKNTTVSRRGPGSTAGGEGQ
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcaggagcaggcggcgagctcgcggccgtccaggtccagcagcgagaggtcctccagc
tccgcgcaccacatcgacatggaggtcaaggaagggatggagagcgacgaggagataagg
agagtgccggagctgggcctggagctccccggcggcgcttccacgtcggggagggaggcc
ggagctggcgccggcggcccggagcgcgcccagtcgtccacggcgcaggccagctcgcgc
cgccgcgtgcgcagccccgccgacaaggagcacaagcgcctcaaaagattactgaggaac
cgggtgtcagcccaacaggcaagagagaggaagaaggcttatctgactgacctagaggtg
aaggtaaaggacctggagaagaataactcagagatggaagagaagctctccaccctccag
aatgagaaccagatgctccgacagatactgaagaacaccactgtaagcagaagaggccca
ggcagcactgctggtggagagggccaatag

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