Panicum virgatum (switchgrass): 120682442
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Entry
120682442 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120682442
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120682442
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120682442
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120682442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120682442
NCBI-ProteinID:
XP_039820295
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All DBs
Position
2K:49778581..49782589
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AA seq
701 aa
AA seq
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MAVLRGRRRCRGAVLLLLLASVLAPLVLYGGSPVSVAHLPDSTAASGAFDREDAPNLVWP
QIAASGVSLARDLTIERLGEHKNRVLSATDHLQAVEAASRSRASGKPDASVLREEPESRN
AVVEGNGNAGLGQGGVIREVVGSEGSAGRFGEPGDGKDAVARNGKEVGIKLPHSIDAEHK
DGSDEGGESIISGMHTTGSLSSSSSQTRDATTTRDNQTRLSNSSSAHRTTNRHTGQLTTS
PDATVHINIIKDQLTRAKTYLGFFASRGNHGFARELRARMRDIQRALGDATSDWQLPQNV
HSKIRAMEQTLVKVKKIHDSCSGAVNRRHTVLHSTEQQLESNKRQANYLAQVAAKSLPKG
LHCLTLRLTNEYYFTNSTNKDFPYVEKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKP
EDHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFKWLNSSYSPVLKQLESQFMID
YYFKSGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVRRDLTALWL
VDLKGKVNGAVETCRETFHRFDKYLNFSNPLIAKNFDPHACGWAYGMNMFDLSEWRKQNI
TEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNERDIRRAA
VIHYNGNLKPWLEIGLPKYRKYWSTHVNFNQVFLRECNINP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgcggggccggcggcggtgccgaggcgcggtgctgctgctgctcctcgcg
tcggtgctcgcgccgctcgtgctctacgggggctcccccgtctcggtcgcgcacctcccg
gactccaccgcggcgagcggcgcgttcgatcgggaggacgctcccaatctggtgtggccg
cagatagctgcgtccggggtgtccctggccagagatttgacgatcgagaggcttggggag
cacaaaaaccgtgtgctatctgcaaccgatcatttgcaagcagttgaggcagcgagtagg
agccgtgcgtccggaaagcctgatgcaagtgtgctgagggaggagcccgagtcacggaat
gcggttgttgaggggaatggcaacgcagggttgggacagggtggcgtgataagggaagtt
gttggaagtgagggaagtgcaggtagatttggtgagccgggggatggcaaggatgctgta
gcgcggaatggaaaagaggttgggataaagttgccgcattcaattgatgcagagcacaag
gatgggtcagatgaaggaggggagagcatcatttctggaatgcacactactggaagcctg
agttcatcttctagtcagactagagatgctactaccaccagggacaatcaaacaaggttg
agtaacagtagttctgctcatcgcacaacgaatagacatactggtcaattgacaacatca
ccagatgctacagttcacatcaacatcatcaaggaccagttgacaagagcaaagacatat
cttgggttttttgcttctagaggcaatcatggatttgcaagggagctccgtgcacggatg
agagatatacaacgtgctctaggtgatgcgactagtgattggcagctacctcagaatgtc
cacagcaaaattagagcaatggagcagacgctggtgaaggtcaagaaaattcatgatagt
tgctcaggtgctgtgaacaggcgtcacacagtccttcactcaacggagcagcaacttgaa
tcaaacaaaagacaggccaactatctagcacaagtagcagcaaaatctctacccaagggt
ctccattgccttacactgaggcttacaaatgagtattatttcaccaactcaacgaataag
gattttccatatgtggagaagctggaagaccccaaactctaccactatgccttgttttca
gacaatgtattggctgctgcagtggttgttaactcaactcttgttcatgctaagaaacca
gaagatcatgtattccacattgtgacagataggcttaactatgctgcaatgaaaatgtgg
ttcctggctaatccattgggtaaagctgctattcaggttcagaacattgaagagtttaaa
tggctaaattcaagctacagtccagttctgaagcagctggaatcacagtttatgattgat
tactacttcaaaagtgggcatgctaggcctgacgaaaatcctaagtttcggaaccccaaa
tacttgtcgattctcaaccatctgaggttttatctccctgagatcttcccaaagcttaac
aaggtgttatttctagacgatgatactgtagtgcggcgggacctaactgcactttggttg
gtagatctcaaaggcaaggttaatggtgctgttgagacctgtagagagacattccatagg
tttgataagtacctaaacttctcaaatcctcttattgccaaaaattttgatccgcatgca
tgtggttgggcatatggcatgaacatgtttgatttgtctgagtggagaaagcaaaacatc
actgaggtttaccatacctggcagaaactgaatgagaacaggctattgtggaagctaggt
accctccctgctggccttgtaacattctggaaccgtactttccctcttgatcgttcctgg
catcagttgggacttgggtacaatccaaatgtcaacgaaagggatatcaggcgggcagct
gtcatccactacaatggaaatctgaaaccctggctcgagattggattgcccaaataccgg
aaatactggtccacacatgtcaatttcaaccaagtgtttctacgagagtgcaatataaat
ccctga
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