Panicum virgatum (switchgrass): 120682497
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Entry
120682497 CDS
T07260
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120682497
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
120682497
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120682497
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
120682497
NCBI-ProteinID:
XP_039820384
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Position
7N:complement(34723844..34728511)
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AA seq
571 aa
AA seq
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MATAAAAAVAAPEQPRRRKPAPGRGGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGEDV
DLNALKSAACRKYGLARAPKLVEMIAAVPEADRAALLPRLRAKPVRTASGIAVVAVMSKP
HRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLK
RLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHSAVKCI
GMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKD
AGFKVVAHMMPDLPNVGIERDLESFREFFESPAFRADGLKIYPTLVIRGTGLYELWKTGR
YRNYPPELLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGL
KCRDVRTREAGIQDIHHKIRPDEVELVRRDYAANEGWETFLSYEDTRQDILIGLLRLRKC
GRNVTCPELVGRCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSK
KLAVISGVGTRHYYRKLGYELEGPYMVKCLA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgccgccgccgccgtggcggcaccggagcagccgcgccgccggaagccg
gcgccggggcgcgggggcgtggtcctccccgcgggcctctcggaggaggaggcccgtgtg
cgggccatcgcggagatcgtgtcggcgatgggggagctctcgcggcgcggggaggacgtg
gacctcaacgcgctcaagtccgccgcgtgccgaaagtacgggctggcgcgggcgcccaag
ctggtggagatgatcgccgccgtgcctgaggccgaccgcgccgcgctgctgccgcggctg
cgcgccaagcccgtgcgcacggcctcgggcatcgccgtcgttgccgtcatgtcgaagccg
caccggtgcccccacatcgctaccaccgggaacatctgcgtctactgcccgggaggcccg
gactccgacttcgagtacagcacgcagtcctacactggatacgagcccactagcatgcgt
gccattcgggcaaggtacaatccatatgtgcaagccagaagcaggatagatcagctcaag
aggctaggacatagtgtggataaggttgaattcatcttgatgggtgggactttcatgtcc
ctaccagctgattatcgtgattatttcatcagaaatcttcatgatgctttatcgggtcac
acttctgcaaatgttgaggaggctgtttgttattcagaacatagtgctgtcaaatgtatt
ggtatgacgattgagacgagacctgattattgcttgggccctcatctgcgccagatgcta
tcttatggatgtacccgcttagaaattggtgttcagagtacatatgaggatgtcgcccgt
gacacaaacaggggtcacacggtggctgctgttgctgattgcttttgtttggcaaaagat
gctgggtttaaggtggttgcccacatgatgccagatttacctaacgttggaatagaaaga
gacctggaaagtttcagagagttttttgaaagtccagcattccgggccgatggtctaaag
atttatccaacacttgtgattcgtggaactggtctttatgagctctggaaaactggcaga
tatagaaattatccacctgagcttttggtggatattgtggctaggattctgtctatggta
ccaccatggacacgagtgtatcgggtccagagagatattcctatgccacttgtcacttct
ggtgttgagaaaggtaaccttcgtgagcttgctttggctcgaatggaagatctgggcttg
aaatgccgagatgtcagaacccgtgaggcagggattcaggatatccatcacaaaatcagg
ccagatgaagtagagcttgtcaggcgtgactatgctgcaaatgagggttgggagacgttc
ctctcttatgaggatacacgacaggatatcctgattggcctattgcgcttgcgtaaatgc
ggccgtaatgttacatgccctgaactcgtagggaggtgttcaattgttcgtgagcttcat
gtctatggaactgcagtccctgtgcatggtcgtgatgcagataaactacagcaccagggc
tatggaactctactaatggaagaagcagagagaatcgctcgaagggagcaccgttcgaag
aaattggctgtgatttcaggagttggtactcgccactattaccgcaagttgggttatgag
cttgaagggccttacatggtcaaatgtttggcatga
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