Panicum virgatum (switchgrass): 120682499
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Entry
120682499 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 6
KO
K03037
26S proteasome regulatory subunit N7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120682499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120682499
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120682499
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
RPN7_PSMD6_C
Motif
Other DBs
NCBI-GeneID:
120682499
NCBI-ProteinID:
XP_039820386
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Position
7N:34728675..34731449
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AA seq
388 aa
AA seq
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MDGAGEDGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMAALYESLAADG
VLEMDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKAL
EQLKVTEGKTVAVGQKMDLVFYTLQIGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLK
VYEGLYYMATRNFKKAASLFLDSISTFTTYELFTYDTFIFYTVLTSVISLDRVSLKQKVV
DAPEILAVIGKVPHLSEFLNSLYNCQYKSFFIAFSGLTEQIKLDRYLQPHFRYYMREVRT
VVYSQFLESYKSVTMEAMAAAFGVTIDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDA
RNAFYQATIKQGDFLLNRIQKLSRVIDL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacggagccggagaggacgggaagcagcagccgcacctggtgctggcgcacaagctg
ttcttgctgtcgcaccccgatgtggacgacctcgccaaggtcgacctccgtgccgacgtt
ctcgcggctgtcaaatccgacgatatggcggcgctgtacgagtcgctggcggccgacggc
gtgctggagatggacgcggcgctgctggccgagatgcgcgccaggatcgacgaggagatc
cggaagctcgacgagaaaattgctgatgctgaggagaacttgggtgagagtgaagtgcgg
gaggcccatcttgccaaatccttgtatttcataagggttggggagaaggaaaaagctctg
gagcagcttaaagttactgaaggaaaaaccgtagctgttggccaaaagatggaccttgtt
ttctatacgttgcaaattggatttttctacatggactttgatctcatctcaaagtccatt
gacaaggccaaaaacctgtttgaggagggtggcgattgggagaggaagaatagattgaaa
gtgtatgaaggattgtactacatggcaactagaaacttcaagaaagctgctagcttattt
ttggattcgatttcaacattcacaacttatgagctgttcacctacgatacattcatcttc
tacacagtcctcacaagtgttatctcactggatcgtgtttctctaaagcagaaggttgta
gatgcacctgagatcctcgctgtaattggcaaagtacctcacctatccgagtttctcaat
tcgctctacaattgccagtacaagtcattttttattgcattctctggcttgacggaacag
atcaagttggaccgttaccttcagcctcatttccgctactacatgcgtgaagtgcgcact
gtcgtctactcacaatttctggaatcgtacaagagtgtgacaatggaagcaatggctgct
gcttttggcgttaccattgatttcattgaccaagaattgtcgcgctttattgctgctggg
aagctccactgcaagatagacaaagttgctggcgtcttggagacaaaccgacctgatgcc
aggaatgccttctaccaggcaaccatcaagcaaggcgacttcctgctgaaccgcatccag
aagctatcacgagttattgacctgtag
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