Panicum virgatum (switchgrass): 120682502
Help
Entry
120682502 CDS
T07260
Name
(RefSeq) gamma-aminobutyrate transaminase 1, mitochondrial
KO
K16871
4-aminobutyrate---pyruvate transaminase [EC:
2.6.1.96
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120682502
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120682502
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.96 4-aminobutyrate---pyruvate transaminase
120682502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
120682502
NCBI-ProteinID:
XP_039820390
LinkDB
All DBs
Position
7N:45501996..45506227
Genome browser
AA seq
448 aa
AA seq
DB search
MLAPFTAGWQSNDLHPLIIERSEGSYVYDINGNKYLDSLAGLWCTALGGSEPRLVKAATD
QLNKLPFYHSFWNRTTRPSLDLAQEILSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNN
ALGRPNKKKFIARTKAYHGSTLISASLTGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGE
TEEEFATRLATNLENLILKEGPETIAAFIAEPVMGAGGVIPPPKTYFDKIQAVVKKYDIL
FIADEVITAFGRLGTMFGSDYYNIKPDLVSLAKALSNAYVPIGATLVSPEISDVIHSQSN
KLGSFAHGFTYSGHPVACAVAIEALKIYRERDIPGHVRQIAPKFQDGIRAFADSPIIGEI
RGLGMIMGTEFTNNKSPTDVFPAEWGVGAIFGQECQKRGMLVRVAGDAIMMSPTLIMTPG
EVDELVSIYGEALKATEARVAELKSKRS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaccctttacagctggctggcagagcaatgacttgcatccactgattatcgag
agatctgagggttcctatgtttatgacataaatggaaataagtacctagattctcttgca
ggactatggtgtacagctttaggtggtagcgagcctcgattagtcaaagcagcaactgat
caattaaacaagttacccttctatcattccttttggaaccgcacaaccagaccttcattg
gatcttgcgcaggagattcttagcatgttcactgcacgggaaatgggaaaagtgttcttc
acaaatagtggttcagaagcaaatgactctcaggtcaaactggtatggtattataacaat
gcattggggaggccaaacaagaagaaatttattgcacggacaaaagcataccatgggtct
acattgatatcagcgagcttaactggtcttcctgccctgcaccagaagtttgatctgcca
gcaccttttgttctgcacactgactgccctcactactggcgttatcatctacctggtgag
acagaagaagaatttgctactagacttgccacaaatttagagaatcttattctcaaagaa
ggaccagaaacaattgctgctttcattgctgaacctgtgatgggtgctggtggtgtcatc
cctcctccaaagacctattttgacaagattcaagcagtggtcaagaagtatgacattctt
ttcatagcagatgaggtcatcactgcatttggaagattgggaaccatgtttggatctgat
tattataacatcaaaccggatcttgtttcactagctaaggctctttcaaatgcctatgta
cccatcggagcaactctcgttagcccagagatatcagatgtgattcattcccagagcaat
aagcttggttcatttgctcatggctttacatactcgggccatccagttgcctgtgctgtg
gccatagaagctctgaaaatttatcgcgaaagggatattccgggccatgtcaggcagatt
gctccaaagtttcaggatggaattagggcatttgcagacagtccaattatcggggagata
cgtggcttagggatgataatgggaactgaattcaccaataacaagtccccaactgatgta
ttccctgctgaatggggcgttggtgcgatctttgggcaggagtgccagaagcgcggcatg
ctggtgagggttgccggcgacgctatcatgatgtcgccgacactgatcatgacacctggg
gaagtcgacgagctggtgagcatctacggggaagcccttaaggccacggaggcgagggtg
gcggagctgaaatccaagaggagttag
DBGET
integrated database retrieval system
