Panicum virgatum (switchgrass): 120682516
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Entry
120682516 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 10
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120682516
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120682516
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120682516
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120682516
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
New_glue
Motif
Other DBs
NCBI-GeneID:
120682516
NCBI-ProteinID:
XP_039820404
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Position
7N:46990535..46993111
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AA seq
557 aa
AA seq
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MRRRPFLDQRRPSFKRRWQQRPWWVRLALSLLLALACVLLLAVLLGSPDPGASPSTSTAS
SGSEATSSPLLRQRSYLELEGITDALNMTDEMLSARSFSRQLMDQIYLAKTYVVVAKEAN
NLQFAAELSAHVRRAQSILTHAAAHGGTVLEQEAEKAIRDMSVLLFQAQQLRYDSGITIM
KLKGQIQALEEKSKAEAEKSTKYGQIAAEELPKGLYCLGVRLTMEWFKSSELQRKFSDRS
PTVQNNLRDNSLYHFCVFSDNILAVSVVVNSTAINSKHPEKIVFHLVTDELNYAPMRAWF
AMSDYRGVTVDIQKVEDFTWLNASYVPVLKQLQNAATQKFYFSGSGNRGTPIKFRNPKYL
SMLNHLRFYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETFHRFH
KYLNHSHPLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQGRNADHTLWKLGSL
PPGLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEGAVLHYNGNMKPWLKIGMEKYKSFW
DNYVDYSHPLIQQCFMR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcggccgttcctggaccagcggcggccgtcgttcaagcgccggtggcagcag
cggccgtggtgggtgcgcctcgcgctctcgctactcctcgccctcgcctgcgtcctcctc
ctcgccgttctcctcggctcccccgaccccggcgcctcgccgtccacctccaccgcctcc
tctggatccgaggccacctcctcccctctcctccgtcagagatcttacctggagctggag
ggcatcacggatgcgctcaacatgactgacgaaatgctgagcgctcgctcgttctccagg
cagctcatggaccagatttatctagccaaaacttatgtcgtcgtcgcgaaggaggccaat
aacctgcagtttgcggcggagcttagtgcccatgtgcggcgggcgcagagcatcctcaca
cacgctgcagctcacgggggtacggtgctggagcaggaagcagagaaggcgatcagggat
atgtctgtgctgctcttccaggcgcagcagctgcggtatgacagcggcatcacaatcatg
aagttgaaaggccagattcaggctctagaggagaagtcgaaagctgaggcagagaagagc
acaaaatacgggcagattgctgctgaggagcttccaaaggggctttactgccttggtgtc
cggttaaccatggaatggttcaagagttctgagcttcagaggaagttttcagataggagc
cctacagtgcagaacaacctaagggataacagcctttatcatttttgtgtcttctcagac
aatatccttgctgtttcagttgttgtcaattctacagctataaactcaaagcaccctgaa
aagattgtctttcacctagttaccgatgagttgaactatgctccaatgagggcatggttt
gccatgagtgactacagaggggtcactgtggatatacaaaaggtggaggactttacttgg
ctcaatgcatcgtatgttcctgttcttaaacagctgcagaacgctgctactcagaagttc
tacttctctggcagtggtaaccgcggaacaccaattaaattcaggaacccaaagtaccta
tccatgcttaaccacttgaggttttacattccagaaatatatcctgaattgcagaaggtg
gtatttcttgatgatgatattgttgttcagaaggatttgtccgaactgtttacgatcaac
ctcaatggtaatgtgatgggtgctgtggaaacttgcatggagacatttcacaggtttcat
aagtatcttaaccattcccatcctctaatccgtgctcattttgaccctgatgcttgtggc
tgggcatttggtatgaacgtgctcgatcttgtcgaatggaggaacaagaatgtgacaggt
atatatcattattggcaggggcgcaatgctgatcataccctatggaagcttgggtcttta
ccgcctgggcttcttgctttctatggtttggttgaagcactggatcccaaatggcatgtc
ttgggacttggctacactactgtggatcctgctaccatcaaggaaggggcagtgctgcat
tacaatggaaatatgaagccatggctcaaaattggaatggagaagtacaagagcttttgg
gataactatgtggactattcacaccctttgattcagcagtgcttcatgcgttga
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