Panicum virgatum (switchgrass): 120682539 Help Entry 120682539         CDS       T07260                                  Name (RefSeq) DNA repair protein RAD5B-like   KO K15505   DNA repair protein RAD5 [EC:5.6.2.-] Organism pvir  Panicum virgatum (switchgrass) Brite KEGG Orthology (KO) [BR:pvir00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pvir03400]     120682539 DNA repair and recombination proteins [BR:pvir03400]  Eukaryotic type   TLS (translesion DNA synthesis) factors    Rad6 epistasis group     120682539 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 UBA_RAD5A zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 DEAD ResIII zf-RING_4 UBA HDA2-3 Motif Other DBs NCBI-GeneID:  120682539 NCBI-ProteinID:  XP_039820429 LinkDB All DBs Position 7N:complement(15493145..15500898) Genome browser AA seq 1172 aa AA seqDB search MLVSVDDDSSGWQESPSQAVLFADEIAAVRAVLGAGLPEARVVAALSRCGGNAQRAINAL LDDSAGAAEAGPTDTGHGDGATPKPVKVERDVGGAPPPAKVKAEALDDEVVGSHDSGASA KADARVKGEPADWCSKEPSVEPHRVKERTAGGGRDAPRKCVAAAAAASGGGGISLVPRPK KRPREEVETIDLTATHPVPYLNPKPIRALPPPVDPSPILVVPPLDVQMYDPRPVLPAPPP MDVEMYELQPRPPPRPHRAPAPAPVTDMRMVVAPPDAEFCDFPEERDWLLVGKSYVPGLS TNRGRRRMDTGEIVHFAFPSFERSYGGVKMSAKKAAALAAIVRFSTKRAGEIGRLPQEWT QCLVPLVNSSKVKIHGKIVFPTIELRLMQEILLYVSFYIHKSVFTEMDNSSCDMLGHANV NFSSSPLHQLLTLLKLKASNKDDFSLGDLSTRKLQRILRGNQNSGDESTPVLGQTFLEQG PDEQAISEAALNKLVGTAETFDLEEAEPPSTLVSVLKPYQKQALFWMSKLEKGMDANEAT KTLNPCWSAYNIADKRAPAVYINIFTGQTTTQFPSATGTARGGILADAMGLGKTVMTIAL ILSNPRGECSNFVERDTRGLRDHGTRSRTSRSSVQGGTLIVCPMPLLGQWKDELEAHSTP GALSVFVHYGGDKTDNLLLMAQHDVVLTTYGVLSAAYKANGSSIFHRMDWYRIVLDEAHT IKSPKTKGAQAAFGLNSECRWCLTGTPLQNNLEDLYSLFCFLHVEPWCNANWWQKLIQKP YENGDDRGLKIVRAILRPLMLRRTKETKDKIGNPILVLPPAHIEVVECEQSEHERDFYEA LFRRSKVQFDKFVAQGSVLSNYANILELLLRLRQCCNHPFLVISRADPQKYADLDQLAQR FLEGVQNCSGRQNALPSRAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCREC LLSSWRTPDGGPCPLCRSHISKSDLIILPAQCRFEVDAENNWKDSCKVSKLILILEDLQK KKEKSIVFSQFTSFFDLLEIPFNRKGMKFLRYDGRLSQKHKEKVLKEFSESQDKLVLLMS LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRSVQVRRFIVKDTVEERMQ QVQVRKQRMISGALTDEEVRGARIEHLKMLFT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgctggtctccgtcgacgacgactcctccggctggcaggagtccccatcgcaggccgtc ctcttcgccgacgagatcgccgccgtgcgcgctgtcctgggcgcgggcctccccgaggcc cgcgtcgttgccgccctctcccggtgcggcggcaacgcccagcgcgccatcaacgcgctc ctcgacgactccgccggcgctgccgaggcggggcccaccgacacggggcacggcgatggt gccaccccgaagccggtcaaggtggagcgcgatgtcggcggagccccgccgcctgccaag gtgaaggccgaggccctcgacgacgaggtcgtggggagccacgactccggcgcctccgca aaggccgacgccagggtgaagggcgagccggccgattggtgctccaaggagccgtcggtg gagccgcatcgggtcaaggagaggaccgctggcggcggccgcgacgcgccaagaaaatgc gttgctgccgcggcggcggcgagcggcggtggaggcataagcctcgtgccgcggccgaag aagaggccgagggaggaggtggagaccatcgacctcaccgccacccacccggtgccgtac ctcaacccgaagcccatccgggcgctgccgccgcccgtcgacccgagccccatcctggtg gtgccgcccctggatgtccagatgtatgacccgaggcccgtcctgcctgcgccgccgcct atggacgtcgagatgtacgaactgcagccccggccaccgccacggccccacagggcgcct gcccctgccccggtgacggacatgaggatggtggtggcgccgccggacgccgagttttgc gacttccccgaggagcgcgactggttgctcgttggcaagtcctatgtgcccgggttgtcc accaaccgtgggaggaggaggatggacaccggggagattgtccattttgcattcccttcg ttcgagaggagctatggcggggtaaagatgtcagccaagaaggcggcggctctggcggcg attgtgcgcttctccaccaaacgagctggagagattgggaggctaccacaagagtggacg caatgccttgtcccgcttgtcaactcgtccaaggtgaagattcacgggaagattgtgttc ccaacaatagagctgaggctgatgcaggagattttgctgtatgttagcttctacatccac aaatctgtgttcactgaaatggacaactcatcatgtgacatgctgggtcatgcaaatgtc aatttctcttccagtcctcttcatcaattgcttaccctactcaagctaaaggcatccaac aaggatgatttctctcttggtgacctcagcacaagaaagctgcagcgaattctaaggggg aaccaaaacagcggcgatgaatccactcctgtgcttggccagacctttctagagcaaggc cctgatgagcaggctatttcagaggctgccttgaacaaacttgttggcactgctgaaaca tttgatttagaggaagcagagcctccgagtacccttgtctctgttctaaaaccataccaa aaacaagctctcttctggatgtcgaaattagagaagggaatggatgctaatgaagcaaca aaaactctcaatccctgttggagtgcctacaatattgcagacaagagagctcctgctgtg tatattaatattttcactggtcaaacaacaacacaatttccaagtgcaactgggactgca agaggagggatactagcagatgcaatgggtcttggcaaaactgttatgaccattgctctt atactttcaaaccctaggggagagtgttctaactttgtagaaagagatacaagaggcctg agagatcatgggaccagatcacgcacctcaagatcctctgtacaaggaggtacccttatt gtttgtccaatgccgttattgggtcaatggaaagatgaattggaggcacattcaacacca ggagccctttcagtttttgtgcactatggtggtgataaaacagataacctcttgttgatg gctcagcatgatgttgtgttgacgacgtatggtgtcctttcagccgcatacaaagctaat ggcagcagcatctttcataggatggattggtataggattgtgcttgatgaagctcataca atcaaatctcctaaaactaaaggggcccaagcagcttttggattaaactcagaatgcaga tggtgccttacaggcacaccgttgcaaaataatttggaggacctctatagtcttttctgc ttcttgcatgttgagccatggtgcaatgcaaattggtggcagaaacttattcagaaacct tatgagaatggtgatgatagaggattgaaaattgttagagctattctcaggccactaatg ctgaggaggaccaaggaaacaaaagacaagattggaaatcctatactggtcctccctcca gctcatattgaagttgtagaatgtgaacaatctgaacatgaacgtgatttctatgaagcg cttttcaggaggtcaaaggttcaatttgacaaatttgtagcacaaggcagtgttcttagc aactatgctaatattcttgagctacttctccggctaagacaatgctgcaatcaccctttt ttagttatcagccgtgctgatcctcaaaagtatgctgaccttgaccagctagcacagcgg ttccttgaaggagtccaaaattgttctggaagacagaatgcgctaccctcacgtgcttat gttgaagaggttgttgaagagattcgacagggtgctactactgagtgccctatctgcctt gagtcagcttctgatgatcctgtgctcactccttgcgcacatcggatgtgccgcgaatgc cttctttctagctggaggactccagatggagggccatgtcccctgtgtcgaagtcacatc agcaaatctgacctgatcatattgcctgctcagtgtcgctttgaagttgatgctgaaaat aactggaaggactcctgcaaagtgagcaaacttatcttgattctggaggatctgcagaag aaaaaggagaagagcattgtatttagccagttcacttcattctttgatctcctagagatc cccttcaatcgtaagggtatgaagttcctgaggtatgatggcaggttgagccagaagcat aaagaaaaagttctgaaggagtttagtgaaagtcaggacaagttggtgctactgatgtca cttaaagctggaggcgtagggttaaatcttactgcagcatccaatgttttcctgatggat ccatggtggaaccctgcagtggaagagcaggctatcatgagaattcaccgcattgggcaa aaaagatcagtccaagtgagacgattcatcgtgaaggataccgttgaggagcggatgcaa caagtgcaagtgcgcaagcagaggatgatttctggggcactgacagatgaggaagtccgt ggtgctcgcatcgagcatctcaagatgttgtttacatga

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