Panicum virgatum (switchgrass): 120682779
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Entry
120682779 CDS
T07260
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120682779
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
120682779
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120682779
Prokaryotic type
120682779
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
120682779
NCBI-ProteinID:
XP_039820726
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Position
2K:complement(49954333..49957195)
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AA seq
354 aa
AA seq
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MAAVSLSSPPSVLLLSRTATRLSRFQTLAARKPVASTVGGGGGGGKGGGLLSVLDRALAD
EEEYRRARAQVQRKGVEAEGYAIEGISVGGHETCITVPSLNVAFGIGRGPQFAVSQDYLF
ITHAHLDHIGGLPMYIATRGLYNLKPPTVFVPPCIRDDVEELLQVHRRMSHIELNVELVA
LDLGETYEIRNDLVARPFQTYHAIPSQGYVIYSIRRKLKKQYAHLKGSQIMKLKQSGTEI
TDTILYPEVAFTGDTNSDFILDPRNADALRAKVLITEATFLDDHIDVEHAREHGHMHLSE
IMEHSQWFRNETIVLTHFSNRYSLEDIRQAVSRLQPKLHSKVVALTEGFKSEYR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtctctctctcctctcccccctcggtcctccttctctcccgcactgctacc
cgcctgtcccgctttcagacacttgccgcgaggaagccggtggcctccaccgtcggcggg
ggcggaggcggaggcaaagggggtgggctgctgtcggtgctggaccgggcgctggcggat
gaggaagagtaccggcgcgcgcgggctcaggtgcagcgcaagggcgtggaggcggaaggg
tacgccatcgagggcatctcggtgggcgggcacgagacctgcatcaccgtgccgtcgctg
aacgtcgcgttcggcatcggccgcgggccgcagttcgccgtcagccaggactacctcttc
atcacccacgcccacctcgaccacatcggtggtctcccaatgtacatagctacccgtggc
ctctataacttgaagcctcctactgtatttgtaccaccctgcatcagggatgatgttgag
gagctgcttcaggtccatcgcagaatgagtcatattgaactgaacgttgaattagttgca
cttgatttgggagagacgtatgaaatacgtaatgatcttgttgccaggccatttcaaact
taccatgctataccaagccaggggtatgtcatctattctattcgaagaaagttgaaaaag
cagtatgctcatttgaaaggtagtcagataatgaaattgaagcaatcaggcactgagatt
acagataccatactgtacccggaagttgccttcacaggagatacaaattctgattttatt
cttgacccaagaaatgcagatgccctgagagcaaaggttctcataactgaggcaaccttt
ctagatgaccacattgatgttgagcatgctagggagcacggccacatgcatctatctgag
ataatggagcattctcagtggtttagaaatgaaacgatcgtactcactcatttctcaaat
cgatatagtcttgaggatattcgacaggctgtttccaggctacaacctaagttacattca
aaggtcgttgctctgacagaaggtttcaaatctgaatatagataa
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