Panicum virgatum (switchgrass): 120682815
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Entry
120682815 CDS
T07260
Name
(RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic isoform X1
KO
K09458
3-oxoacyl-[acyl-carrier-protein] synthase II [EC:
2.3.1.179
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00780
Biotin metabolism
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir01240
Biosynthesis of cofactors
Module
pvir_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120682815
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120682815
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120682815
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.179 beta-ketoacyl-[acyl-carrier-protein] synthase II
120682815
Lipid biosynthesis proteins [BR:
pvir01004
]
Fatty acid synthase
Component type
120682815
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Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Thiolase_C
KAsynt_C_assoc
Motif
Other DBs
NCBI-GeneID:
120682815
NCBI-ProteinID:
XP_039820771
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Position
7N:complement(31623664..31627635)
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AA seq
461 aa
AA seq
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MQAPAHTLGLRLPPPSSARPRPGRRPAVRAAAAATQAAPRRETDPRKRVVITGMGLVSVF
GTDVGAFYDRLLQGESGVGPIDRFDAGSFPTRFAAQIRGFSSEGYIDGKNDRRLDDCLRY
CIVSGKKALENAGLAKGSDAHAKLDKVRAGVLVGTGMGGLTVFSDGVQNLIEKGYRKISP
FFIPYAITNMGSALLAMDVGFMGPNYSISTACATSNYCFYAAANHIRRGEADIIIAGGTE
AAIIPIGLGGFVACRALSQRNDDPTTASRPWDKERDGFVMGEGAGVLVMESLEHAMKRDA
PIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCIKKSLEDAGVAPEEVNYINAHATSTLAGD
LAEVRAIKQVFNNTSEIKINSTKSMIGHCLGAAGGLEAIATVEAITTGLVHPTINQFNPE
PEVEFDTVANEKKQHEVNVAISNSFGFGGHNSVVVFAPFKP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgcccgcgcacaccctcgggctccgcctgccccctccctcctccgctcgcccg
cgcccgggccggcgcccggccgtccgcgcggcggcggccgccactcaggcggcgccgcgg
cgggagacggacccgaggaaacgggtggtgatcacggggatgggtctggtgtccgtgttc
gggaccgacgttggcgccttctacgaccggctcctgcagggcgagagcggggtcggcccc
atcgaccgcttcgacgccggcagcttccccacccggttcgcggcccagatcaggggattc
tcgtcggagggatacatcgacggcaaaaacgaccgcaggctcgacgactgcctccgatac
tgcatcgtcagcggcaagaaggcgctcgagaacgccggtctcgccaagggctccgacgcg
cacgccaagcttgacaaagtgcgtgctggagttctcgtggggactggcatgggtggcctt
acagtgttttctgatggcgttcagaatctcatcgagaagggatatagaaagatttcaccc
ttcttcattccatatgctataacaaacatgggctccgcgttacttgcaatggatgttggt
tttatgggtcctaactactcaatttcaactgcatgtgctacctccaactattgcttttat
gctgctgcaaaccacatacgacgtggtgaggctgatataatcatagctggtggtactgaa
gctgcaattattcccattggccttggaggttttgtggcctgtagggcgctatcacagagg
aatgatgacccgacaactgcatctaggccatgggacaaggagagggatggttttgttatg
ggtgaaggtgctggtgtactggttatggagagcctggagcatgcaatgaagcgtgatgca
ccaataattgcagaatacttgggaggggcagtgaactgtgacgcttaccatatgactgat
cctagatcagatggactgggtgtatcttcctgtatcaaaaagagccttgaagatgcaggt
gttgcacctgaggaggtgaactacattaatgcgcatgcaacttcaacacttgctggtgac
ttggctgaagtaagagccattaagcaagtcttcaacaatacatccgagataaaaattaat
tcaacgaagtcaatgataggccattgcctaggtgcagctggtggattagaagctatagcc
acggtagaagctataactactggattggtgcatccgacaattaatcaatttaacccagag
cctgaagttgagttcgatacagtagccaatgaaaagaagcagcatgaagtgaatgttgcc
atctcaaattcctttggattcggaggacacaactcggtggtagtatttgctccattcaag
ccgtga
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