Panicum virgatum (switchgrass): 120682853
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Entry
120682853 CDS
T07260
Name
(RefSeq) oxalate--CoA ligase-like
KO
K22133
oxalate---CoA ligase [EC:
6.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120682853
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.8 oxalate---CoA ligase
120682853
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Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
Motif
Other DBs
NCBI-GeneID:
120682853
NCBI-ProteinID:
XP_039820819
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Position
7N:complement(50236113..50238027)
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AA seq
530 aa
AA seq
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MAADAPTPTLTALLNKAAAAFPARRAVSVPGKIELTHADLDALVDAAAARLAADAGVRPG
HVVALSFPNTIELVIMFLAVIRARAVAAPLNPAYTQDEFEFYLSDSESRLLITNAEGNPA
AQAAAAKLGLPHAAATLKDAAGPVHLAGLGCAAANGNGNANGSHSNKQDDNNEPSDVALF
LHTSGTTSRPKGVPLTQANLAASVGNIRSVYRLTEADATVVVLPLFHVHGLLCGLLSSLA
SGASVALPAAGRFSASSFWAEMRASGATWYTAVPTIHQIILDRHAAKPEASYPALRFVRS
CSASLAPAILEKLEAAFGAPVLEAYAMTEASHLMTSNPLPQDGPRKPGSVGRPVGQELAI
LDEEGARVAGGAAGEVCIRGANVTAGYKGNPEANEAAFRFGWFHTGDIGVVDEEGYLHLV
GRIKELINRGGEKISPIEVDAVLLEHPGVAQAVSFGVPDDKYGEEINCAVIPREGSALGA
EDVVAHCRRNLASFKVPKKVFITGELPKTATGKIQRRIVAQHFVQLAKAA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgcccccacccccaccctcacggcgctgctcaacaaggcggccgccgcc
ttcccggcccgccgcgccgtctccgtcccgggcaagatcgagctcacccacgccgacctc
gacgcgctcgtcgacgccgcggccgcgcgcctcgccgccgacgccggggtccgcccggga
cacgtcgtcgcgctctccttccccaacaccatcgagctggtgatcatgttcctggcggtg
atccgcgcccgcgccgtggcggcgccgctcaacccggcctacacccaggacgagttcgag
ttctacctctccgactccgagtcccgcctcctcatcaccaacgccgagggcaaccccgcc
gcgcaggccgccgccgccaagctcggcctgccccacgccgcagccaccctcaaggacgcc
gccggccccgtccacctcgccggcctgggctgcgcggccgccaacgggaacgggaacgcg
aacggctcccactccaacaaacaagacgacaacaacgagccgtccgacgtggcccttttc
ctgcacacctccggcacgacgagccggcccaagggggtgccgctcacgcaggccaacctg
gcggcgtccgtgggcaacatccggtccgtgtaccggctgacggaggcggacgccaccgtg
gtggtgctgccgctgttccacgtgcacgggctcctgtgcgggctcctgagctcgctggcc
tccggcgcgtccgtggcgctcccggcggccgggcggttctcggcgtcgagcttctgggcc
gaaatgcgcgcgtcgggcgccacctggtacacggccgtgcccaccatccaccagatcatc
ctggaccggcacgcggccaagccggaggcgtcgtacccggcgctccggttcgtgcgcagc
tgcagcgcgtcgctggcgccggcgatcctggagaagctggaggcggcgttcggggcgccg
gtgctggaggcgtacgccatgacggaggcgtcgcacctgatgacgtcgaacccgctgccg
caggacgggccgcggaagcccggctcggtggggcggcccgtggggcaggagctggcgatc
ctggacgaggagggcgcgcgggtggcgggcggggcggccggcgaggtgtgcatccgcggc
gcgaacgtgacggcggggtacaagggcaacccggaggcgaacgaggcggcgttccggttc
gggtggttccacacgggcgacatcggcgtggtggacgaggaggggtacctgcacctggtg
gggcgcatcaaggagctgatcaaccgcggcggcgagaagatctcgcccatcgaggtggac
gccgtgctgctggagcacccgggggtggcgcaggcggtgtcgttcggcgtgcccgacgac
aagtacggtgaggagatcaactgcgcggtgatcccgcgcgaggggtcggcgctgggggcg
gaggacgtggtggcgcactgccgcaggaacctagcgtcgttcaaggtgcccaagaaggtg
ttcatcaccggcgagctccccaagacggcgaccggcaagatccagcggcgcatcgtggcg
cagcacttcgtgcagctggccaaggccgcctga
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