Panicum virgatum (switchgrass): 120683041
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Entry
120683041 CDS
T07260
Name
(RefSeq) amino acid transporter AVT3C-like
KO
K14209
solute carrier family 36 (proton-coupled amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120683041
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120683041
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120683041
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC36: Proton-coupled amino acid transporter
120683041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120683041
NCBI-ProteinID:
XP_039820987
LinkDB
All DBs
Position
7N:complement(41371092..41372707)
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AA seq
423 aa
AA seq
DB search
MGFDKEASSSSSRLDAAAPLLPQHGGGGGAGGHLSSQPKTFANVFIAVVGSGVLGLPYTF
SRTGWAAGTLLLLAVAALTFHCMMLLVAARCRIADEHPKIASFGDLGHAVYGAPGRHAVD
AMLVLSQASFCVGYLMFISNTMAHLYPIGADSPASPLLTAKALFIWAMLPFQLGLNSIKT
LTLLAPLSIFADAVDLGAMGVVLGQDASIWLANKPPVFAFAGPAEILYGLGVAVYAFEGI
GMVLPLEAEAADKRRFGATLALSMAFIAIMYGLFGAMGYLAFGAATRDIITTNLGTGWLS
VLVQLGLCINLFFTMPVMMNPVYEVAERLLCGKRYAWWLRWILVVAVGLLAMLVPNFADF
LSLVGSSVCVVLGFVLPAVFHLKVFGGEIGWAALVADVVVIVIGVALAVSGTWTSLVQIF
SSS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgacaaggaggcgagctcctcgtcctcgcggctcgacgcggcggcgccgctg
ctcccgcagcacggcggcggcggcggcgcgggcgggcacctgtcgtcgcagcccaagacg
ttcgccaacgtcttcatcgcggtggtcggctcgggcgtgctgggcctgccctacaccttc
tcccgcacgggctgggcggcggggacgctgctcctcctcgccgtcgccgcgctcaccttc
cactgcatgatgctgctcgtcgccgcgcgctgccggatcgccgacgagcaccccaagatc
gcctctttcggggacctgggccacgccgtctacggcgcgcccgggaggcacgccgtcgac
gccatgctcgtgctcagccaggccagcttctgcgtcggctacctcatgttcatctccaac
accatggcgcacctctaccccatcggggccgactccccggcctccccgctcctcaccgcc
aaggcgctcttcatctgggcgatgctgccgttccagctcggcctcaattccatcaagacg
ctcacgctcctcgcgccgctcagcatcttcgcggacgccgtcgacctcggcgccatgggc
gtcgtcctgggccaggacgcctccatctggctcgccaacaagccccccgtgttcgccttc
gccggccccgccgagatcctctatgggctcggcgtcgccgtctacgccttcgagggaatc
ggcatggtcctgccgctggaggcggaggccgcggacaagcgcaggttcggcgccacgctc
gcgctgtccatggcgttcatcgccatcatgtacgggctgttcggagcgatgggctacctc
gcgttcggcgccgccacgcgggacattatcaccaccaacctcggcacagggtggctctcc
gtcctggtgcagctcggcctctgcatcaacctcttcttcaccatgccagtgatgatgaac
ccggtctacgaggtcgccgagcgcctgctctgcggcaagcgctacgcctggtggctgcgc
tggatcctcgtcgtggccgtcggtctcctggcgatgctcgtgcccaatttcgccgacttc
ctctcgctcgtcgggagcagcgtctgcgtcgtgctggggttcgtgctgcccgccgtgttc
cacctcaaggtgttcggcggcgagatcggttgggccgcgctcgttgccgacgtggtcgtc
atcgttatcggggttgcgcttgcggtgtccgggacatggacatcgctcgttcaaatcttc
agttctagttaa
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