Panicum virgatum (switchgrass): 120683133
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Entry
120683133 CDS
T07260
Name
(RefSeq) transcription factor TGA2.3-like
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120683133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120683133
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120683133
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Microcephalin
Motif
Other DBs
NCBI-GeneID:
120683133
NCBI-ProteinID:
XP_039821097
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Position
2K:complement(50345730..50354559)
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AA seq
499 aa
AA seq
DB search
MASGGSLREQQQEMNISFGMMNSHHGGHHHHQPPSSSSSSSMHAAAASFMSGKEASGAYD
HLGELDQALFMYLDHGSGHGATHQEQRQTLNIFPSQPMHVEPSPKGEISLVLSPAPVGSK
QPRSPDHHHHQQAAMEELAGSRRLQQEHHHLQHQPFPSAGAEPAAAGMTKDVKPALANKK
DHRRGTSTSERDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLAQLEQELHTARAQ
GVFFPNSSLLADQGVAGKGVPIGGIDGLSSEAAMFDVEYGRWQEEHYRLMYELRAALQQH
LPEGELQMYVESCLAHHDEMMGIKEGAIKGDVFHLISGVWRSPAERCFLWLGGFRPSEVI
KMLLSHVEPLTEQQIVGVYGLQQSALETEEALSQGLDALYQSLSDTVVSDALSCPSNVAN
YMGQMAAAMNKLSTLEGFVRQAESLRQQTLHRLHQILTTRQMARSLLAVSDYFHRLRTLS
SLWVTRPRAPQEQPQQGHS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcagcttgagggagcagcagcaggagatgaacatctccttcgggatg
atgaacagccaccacggcggccaccaccaccaccagcctccgtcctcctcctcctcctcc
tccatgcatgcggcggccgcgagcttcatgagcggcaaggaggcgtcaggggcgtatgac
catctgggggagctggaccaggccttgttcatgtacctggatcacggaagcggccatggc
gccacgcaccaagagcaaaggcagacactcaacatcttcccttcccagcccatgcatgtg
gagccatcgccgaagggggagattagtttagtcctgtccccggcgccggtgggatccaag
cagcctaggtcaccggaccatcaccatcaccagcaggccgccatggaggagttggcgggg
agcaggaggctgcagcaggagcaccaccacctgcagcaccaacccttcccttctgccggt
gctgagcctgcagcggccgggatgaccaaggatgtgaagcctgcactggccaataagaag
gatcacaggaggggcacatcgacctctgaacgcgatccgaaaacactgagaaggctggcc
cagaacagggaggcagcaaggaaaagcaggcttaggaagaaggcttacatccagcagctg
gagtccagcaggatcaggctagctcagctcgaacaagaacttcacactgcaagagctcag
ggagtcttcttccccaacagcagcctcctcgccgaccaaggcgtcgccggcaaaggcgtc
cccatcggcggcatcgacggcctcagctcagaggcggcgatgttcgacgtggagtacggg
cggtggcaggaagagcactaccggctgatgtacgagctgcgggcggcgctgcagcagcac
ctgccggagggggagctgcagatgtacgtggagagctgcctggcgcaccacgacgagatg
atgggcatcaaggagggcgccatcaagggcgacgtcttccacctcatctccggcgtctgg
aggagccccgccgagcgctgcttcctctggctcggcggcttccgcccctccgaggtcatc
aagatgctgctgagccacgtggagcccctgacggagcagcagatcgtgggcgtgtacggg
ctgcagcagtcggcgctggagacggaggaggcgctgagccagggcctggacgcgctctac
cagtcgctctccgacaccgtcgtctccgacgcgctcagctgcccctccaacgtcgccaac
tacatgggccagatggccgccgccatgaacaagctctccaccctcgagggcttcgtcaga
caagcggagagccttcggcagcagacgctgcaccggctgcaccagatcctgacgacgcgg
cagatggcgcggtcgctgctggcggtgtccgactacttccaccgcctccgcacgctgagc
tcgctctgggtcacccgccccagggcgccgcaggagcagccgcagcagggccacagctag
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