Panicum virgatum (switchgrass): 120683136
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Entry
120683136 CDS
T07260
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120683136
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120683136
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120683136
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-C3HC4_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
120683136
NCBI-ProteinID:
XP_039821096
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Position
7N:35125570..35141747
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AA seq
589 aa
AA seq
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MDSEDDMHDANDSADDDFYSGGEAGLPGSDDGDADYDFADHDSDDSGELLSHRQQQNYSI
LSEVDIKQRQEDDINRVSTVLSISKSEACVLLRNYNWSVSKVHDEWFADEERVRKIVGLP
EKHMELPNDREVTCGICFESCPRGMMSAAACGHPFCSTCWRGYISTAINDGPGCLMLRCP
DPSCAAAVGQDMINALADDDDKEKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGS
YDVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRPIE
KNQGCMHITCTPPCKFEFCWLCLGPWSEHGERTGGFYACNRYESARQEGAYDESERRREM
AKNSLERYTHYYERWAANQLSRQKALGDLQSLQNDKLEKLSDIQSQPESQLKFIIEAWLQ
IVECRRVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYLEAESP
SKDFNDFRTKLAGLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSKSATSKSLGGKSKS
GKNRASSTSFKSGGSNRGLDDSNIWTCDQCTYANPKSARACQACDRQHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaggacgacatgcacgacgcgaacgactctgccgacgatgacttctacagc
ggcggggaggccgggctccccggcagcgacgacggggacgccgactacgacttcgccgac
cacgactccgacgactccggggagctcctctcccaccggcagcagcaaaattacagcata
ctcagtgaagttgatatcaagcagcgccaagaagatgacataaatagggtttcaactgtt
ctttcaatttctaagtcagaagcatgtgttcttcttcgcaactataactggagtgttagt
aaggtgcatgacgaatggttcgccgatgaagagcgtgttcgtaagattgttggcttacca
gagaagcacatggaactgccaaatgacagagaagtgacatgtggaatatgttttgaaagt
tgccctcgtggcatgatgagtgctgccgcatgtggtcatcctttctgcagtacatgttgg
agaggttacattagcactgctataaatgatggtccagggtgtttgatgttgaggtgtcct
gatccatcctgtgctgctgctgttggacaagatatgataaatgcacttgctgatgacgat
gataaggaaaagtatgggagatatcttcgcagatcgtacatcgaagataacagaaagaca
aaatggtgtcctgctcctggatgtgaatatgcagtggaattcgtcatgggcagtggcagc
tatgatgtcaattgtaattgttcatatgggttttgttggaactgcactgaggaagctcat
cgtccagtagactgtgcaactgtttcaaagtggatcctcaagaacagtgctgaatctgag
aacatgaactggatactggctaattcaaagccttgtcctaaatgcaagcgacctattgaa
aaaaatcagggatgcatgcacatcacatgtactcctccatgcaaatttgagttctgctgg
ctgtgtcttggtccatggtcggagcatggagagaggactggtggattttatgcttgtaac
cgctatgagtcagcaaggcaagaaggagcgtatgatgaatctgaaaggagaagagaaatg
gcaaagaactcccttgagagatatactcattattatgaacgatgggcagccaatcaattg
tcaaggcaaaaagcgttgggagatcttcaaagtctgcagaatgacaagcttgaaaagttg
agtgacatacaaagccaacctgagtcacagctgaagttcatcatagaggcatggttacag
attgtcgaatgtagaagggtattgaagtggacttatgcctatggattttacctgccagag
cacgagcatgccaaaagacagttcttcgaatatctgcaaggcgaggcagaatcgggtttg
gagcggttgcatcaatgtgcagagaaagaacttcaagtataccttgaagccgaatctccc
tcaaaagatttcaatgatttccgtacaaagctggctggattaactagtgtgactcgcaat
tattttgaaaatcttgtccgggctttggaaaccggattaaatgatgtgggtccttccact
agccatggcacatgcagcaaaagtgcaacttccaagagtcttggtggtaaaagtaagagt
ggcaagaacagggcatcgagcaccagcttcaaatctggtggctcaaacagaggtttggat
gacagcaacatttggacatgtgatcagtgcacatatgcaaaccccaaatcagccagagcc
tgccaggcctgtgatcgccaacatcgatag
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