KEGG   Panicum virgatum (switchgrass): 120683143
Entry
120683143         CDS       T07260                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic-like isoform X1
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00860  Porphyrin metabolism
pvir00970  Aminoacyl-tRNA biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    120683143
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    120683143
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pvir01007]
    120683143
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvir03016]
    120683143
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvir02048]
    120683143
Enzymes [BR:pvir01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     120683143
Amino acid related enzymes [BR:pvir01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   120683143
Transfer RNA biogenesis [BR:pvir03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    120683143
 Prokaryotic type
   Other AARSs
    120683143
Prokaryotic defense system [BR:pvir02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    120683143
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C GST_C_2 GST_C_3 GST_C_6 tRNA-synt_1e
Other DBs
NCBI-GeneID: 120683143
NCBI-ProteinID: XP_039821106
LinkDB
Position
7N:27023468..27027556
AA seq 715 aa
MEAKLAFSQDSPPISIICAAKVAGISLTVDPSLAAGSAPTLQFGSGESLHGVNPILHFIA
CAASFSSFSGKNAIEFGHVVEWLEYAPIFLSGSEFENACSFVDGYLASRTFLVGHELTIA
DIAVWSNLAGIGQRWESLRKSKKYQNLIRWFNSIDAEYKDTLNEIVASYVGKRGIGKSPA
PSLKEKVHDSKDPSAPEVDLPGAKVGQVCVRFAPEPSGYLHIGHAKAALLNKYFAERYQG
RLIVRFDDTNPSKESNEFVENLLKDIETLGIKYDAVTYTSDYFPKLMEMAESLIKQGKAY
IDDTPKEQMRKERMDGIESRCRNNTVEENLSLWKEMVNGTERGMQCCVRGKLDMQDPNKS
LRDPVYYRCNTDPHHRVGSKYKVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQYYRIL
QDMWLRRVEIYEFSRLNMVYTLLSKRKLLWFVQNKKVEDWTDPRFPTVQGIVRRGLKVEA
LIQFILQQGASKNLNLMEWDKLWTINKKIIDPVCARHTAVLKDQRVILTLTNGPEKPFVR
ILPRHKKCEAAGKKATTFANRIWLDYSDASAISKGEEVTLMDWGNAIIKEIKMETGVITE
LVGELHLEGSVKTTKLKTTWLADIDELVPLSLVEFDYLISKKKLEEDEDFLDNLNPCTRR
ETPALGDANMRNLKLGEVIQLERKGYYRCDAPFIRSSKPVVLFAIPDGRQQASLN
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggaggcaaagttggcattctcccaggacagcccaccgatttctatcatctgtgcggct
aaggttgcgggcatatccctaactgttgatcctagtcttgctgctggctcggcacccaca
ctacagtttggttctggagaatcactccatggtgtaaacccaatcctccacttcattgcc
tgtgctgcatcattttccagcttctctgggaagaatgccattgagttcgggcatgttgtt
gaatggcttgaatatgcccccatattcctttccggctcagaatttgaaaatgcctgctca
tttgttgatggatacttggcctccaggacctttctggttggtcatgagctgacaattgct
gacattgcagtgtggtcgaatcttgctgggattggtcaacggtgggagagtctaaggaaa
tcaaagaaataccaaaatcttatccggtggtttaacagcatagacgcagaatacaaggat
acactgaatgaaattgtggcatcatatgttgggaaacgaggaattggaaaatctcctgcg
ccaagccttaaggagaaggtacatgattcaaaggacccatcagctccagaagttgatctc
ccaggtgcaaaagttgggcaagtttgtgttcgttttgccccagagcctagcgggtacctc
catattggtcatgcaaaggctgcattattgaacaaatactttgctgaaagatatcaaggg
cgcctaatagttcgatttgatgacacgaacccttcaaaagaaagcaacgagtttgtcgag
aaccttctgaaagatattgagacattggggatcaaatatgatgctgtcacatacacatct
gactattttccaaagctaatggaaatggcagagagtttgattaagcaggggaaagcatat
attgatgatacaccaaaggaacaaatgaggaaagagaggatggatggtattgaatcaagg
tgcagaaataatactgtcgaggaaaatctgtcattatggaaagagatggttaacggaact
gagaggggcatgcagtgctgtgtgcggggtaaacttgacatgcaggatcctaacaagtca
ctcagagatcctgtttactaccgctgtaatactgatcctcaccatcgtgttggttcaaag
tacaaggtctacccaacatatgactttgcttgcccatttgttgatgcattggagggagtg
acacatgctcttcgttccagtgaataccatgacaggaatgcacaatattatcgaattcta
caagatatgtggttgaggagagtagaaatttatgaattcagccgattgaatatggtttac
actcttctcagcaagcggaagcttctttggtttgtacaaaacaagaaggttgaagattgg
accgatccacggtttcccacagttcaaggtatagtccgtcgtggcttgaaggttgaggcg
ctgatacaatttatactccaacagggcgcttcaaaaaatctgaatctgatggagtgggat
aaactgtggacaatcaacaagaagataattgatccagtgtgcgcaaggcatactgctgtg
ctaaaagatcagagagtgatccttactcttactaatggtccagagaagccatttgttcga
attttgccaaggcacaagaaatgtgaggctgctggaaagaaggctacaacattcgcaaat
agaatttggctagattattctgatgcatcagccattagcaagggtgaggaagtaacccta
atggactgggggaatgctatcattaaagagatcaagatggagactggagtgattactgaa
ctagttggagaactacatctggagggctctgtgaagacaacaaaattgaagaccacgtgg
ctagcagatatagatgagctagtccccctctcattggtggaatttgattatctcatcagc
aagaaaaaactggaggaggatgaagactttctcgacaatctcaatccttgcactcggcgt
gagaccccagcccttggagacgcaaacatgaggaacctcaagctcggagaagtcatacag
ctcgagaggaaaggctactacaggtgtgatgccccgtttatcaggtcgtcgaaacctgtg
gtcctatttgcgatcccagatggtcggcagcaggcttcgctgaactag

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