Panicum virgatum (switchgrass): 120683180
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Entry
120683180 CDS
T07260
Name
(RefSeq) programmed cell death protein 2-like
KO
K14801
pre-rRNA-processing protein TSR4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120683180
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120683180
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
120683180
NCBI-ProteinID:
XP_039821141
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Position
7N:47326792..47329792
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AA seq
364 aa
AA seq
DB search
MAEEVHLGLPGPWAADYREKADHYTTKIGGVPDWPAGDMGIKPEMLQCSLCGAKLCLVAQ
VYAPVVKLNIEERVIYVLVCPTPECGPKPQSWKVLRVQKCRNIEKTAGGNDELGQATGPS
STSVPEEQIDKNKSPDINDDDFDLDALAEALEQAATLASNSKKKNKSKRANAPIKRPVLK
KTDDLSIPVLPCFYIYYDKEQYRGKGTMGSSSNELVLDKEITDATNDEEEKWEGEKYEYD
KAIGADRTFLKFKKRLDAYPEQCFRYSYGGKPLLAATKLQDAGTCRLCGSPRQYELQLMS
PLSYFLHEASDGSTNYAPSSWTWLTLIIYTCSKSCCPSSCGGKPCRCCGGVAEEEIMIQE
DEAV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggtgcatctaggtctgcctggtccctgggcggcggactaccgggagaag
gccgaccactacaccactaagatcggtggagtccccgattggccagctggtgatatgggc
attaagcctgaaatgcttcagtgcagcttatgtggagccaagctttgtctcgttgctcag
gtatatgcacctgtggtgaagctaaacattgaggagagggtaatctatgtgcttgtttgc
ccgacaccagaatgtgggcctaaacctcaaagttggaaggtcctaagagttcaaaaatgc
cgtaatattgagaaaacagcaggtggcaacgatgaattaggtcaagcaactggaccttct
tctacaagtgtcccagaagaacagattgataaaaataagagtcctgatatcaacgatgat
gatttcgatctagatgccttggctgaagcacttgagcaagctgcgacattggcatctaac
tcgaagaagaaaaataaatcaaagcgtgctaatgcccctataaaacgccctgtattaaag
aaaacagatgatctgagcataccagttcttccttgtttttacatatattatgataaggaa
caataccggggaaaaggtactatgggttcaagtagcaatgagttggttttggacaaagaa
ataacagatgcaacaaatgatgaagaagaaaaatgggaaggagaaaagtatgagtatgat
aaagctattggtgccgacagaactttcttaaaattcaagaagcggttggatgcatatcct
gagcaatgctttaggtattcttatggtggcaagccattgttggctgcaacaaagttacaa
gatgctggcacttgtaggctgtgtggctcaccacgccagtatgaattgcaactgatgtct
ccattatcatattttctccatgaagctagtgatggttccacaaattatgcacccagcagc
tggacttggctgactcttatcatctacacttgctcaaagagctgctgcccgtcgtcatgt
ggtggaaagccttgcaggtgttgcgggggtgtagctgaggaggagataatgattcaggag
gatgaagccgtctag
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