Panicum virgatum (switchgrass): 120683188
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Entry
120683188 CDS
T07260
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120683188
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120683188
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120683188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF5384
Motif
Other DBs
NCBI-GeneID:
120683188
NCBI-ProteinID:
XP_039821149
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All DBs
Position
7N:complement(27149001..27151654)
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AA seq
312 aa
AA seq
DB search
MAVQARHLSHASFPHDLHAFRAMEDAAAAAGTAFFDEYGWTTPAPELGGATVPASDFPRG
ELACSYGVGPRKRPRVAAAAAAGFFEDHSAVVRPVTVGSGQERAVGSGTASTSGSVANGA
GASQSPGLLPRLYHHQDVDLDALVTLESERMRAALEEARRRHARALLAAVERAASGRLRA
AEAELGRALRRNAELEDKARQAGAECQAWMGVAQSHEAVAAGLRGTLEQLLLRPPASVGE
AAEDAQSCCFEAPAADAASRAASSCRSCGGGEASVLLLPCRHLCLCRACEAGVDACPVCA
AAKNASLHVLLS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcaggcgcgccacctctcccacgcctccttcccccacgacctccacgccttc
agggctatggaggacgcggcggcggccgccggcacggcgttcttcgacgagtacggctgg
accacgccggcgccagagctcggcggcgcgacggtgcccgccagtgacttcccgcgcggc
gagctggcgtgcagctacggcgtcgggccgaggaagcggccgcgcgtggcggcggcggcg
gcggcgggtttcttcgaggatcacagcgcggtcgtccggccagtgacagtgggcagcggg
caggaaagagcggtgggctccggcacggcgtccacaagcgggagtgtcgccaatggcgcc
ggcgcctcgcagtcgccgggcctcctgccgaggctgtaccaccaccaggacgtcgatctc
gacgcgctcgtaacactcgagagcgagaggatgcgcgcggccctggaggaggcccggcgc
aggcacgcccgggcgctgctggcggccgtggagcgcgccgcgtcggggcggctgcgcgcg
gcggaggccgagctggggcgcgcgctccgccgcaacgcggagctggaggacaaggcccgg
caggcgggggccgagtgccaagcgtggatgggcgtcgcccagagccacgaggccgtcgcc
gccgggctccgcggcacgctggagcagctcctcctccgaccccccgcgtccgtgggcgag
gccgccgaggacgcgcagtcgtgctgcttcgaggcgccggccgcggacgcggcgtcgcgc
gcagcgtcgtcgtgcaggtcgtgcggcggcggcgaggcgagcgtgctgctgctcccgtgc
cggcacctgtgcctgtgccgcgcgtgcgaggccggggtggacgcgtgccccgtctgcgcc
gccgccaagaacgcctcgctccatgtcctgctgtcctga
DBGET
integrated database retrieval system
