KEGG   Panicum virgatum (switchgrass): 120683274
Entry
120683274         CDS       T07260                                 
Name
(RefSeq) splicing factor U2af small subunit A-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120683274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120683274
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120683274
 Complex B
    120683274
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 120683274
NCBI-ProteinID: XP_039821272
LinkDB
Position
2K:50516613..50518441
AA seq 284 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP
GVDAQGNPIDPERIQEDFEDFYEDIFEELSKHGEIESLHVCDNLADHMIGNVYVEFREEE
QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL
RRKLFGHLLRSRRSHSRSSRSPSPYRRRRSSSRSRDRDDDYDYYYHYRSGSVSRRSSGRH
RSHDSDGSRRRRGRSRSRSPVREGSEERRARIEQWNHEREAAQV
NT seq 855 nt   +upstreamnt  +downstreamnt
atggctgagcacctggcgtccatcttcggcacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggcgcgtgccggcacggcgaccggtgctcccgcctgcacaacaagccg
tccatctcgccgacgctgctgctctgcaacatgtaccagcgcccggacatgatcaccccg
ggcgtggacgcgcagggcaaccccatcgacccggagcggatccaggaggacttcgaggac
ttctacgaggacatcttcgaggagctcagcaagcacggcgagatcgagagcctccacgtc
tgcgacaacctcgccgaccacatgatcgggaacgtctacgtggagttccgcgaggaggag
caggccgcccgcgcgctgcaggcgctgcagggccgctactactcgggccgccccatcatc
gccgagttctcgcctgtcaccgacttccgggaggccacctgccgccagttcgaggagcac
agctgcaaccgcggcgggtactgcaacttcatgcacgtcaagcaggtcggccgggacctg
cggcggaagctgttcggccacctgctccggtcccgccggagccacagccggagcagccgc
agcccgagcccgtaccgccgccgccggagctcgtcgcggtcgagggaccgcgacgacgac
tacgactactactaccactaccgtagtggcagtgtcagccggaggagcagcgggaggcac
cgcagccacgacagcgacgggagccgccgccggcgcgggcggtcgaggagccggagcccg
gtgagggaaggcagcgaggagcggagggcgcggatcgagcagtggaatcacgagagggag
gccgcgcaggtgtga

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