Panicum virgatum (switchgrass): 120683304
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Entry
120683304 CDS
T07260
Name
(RefSeq) probable ribose-5-phosphate isomerase 2
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120683304
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120683304
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
120683304
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GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
120683304
NCBI-ProteinID:
XP_039821309
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Position
7N:21572774..21574403
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AA seq
260 aa
AA seq
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MGSAAASPPPSGKVSQDELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDRLGDLLRAGA
LPGVAGVPTSLKTELHAARVGIPLLPLDAASGARIRLSIDGADEVDPDLNLVKGRGGSLL
REKMIEGAGERFVVIVDESKLVPRLGCTGAVPVEVIPFGAPHTLGLVRKVFDGLPGFHAR
LRTVVDGDLGSAPFVTDNGNYIVEMFFEDGIRGDLQDISDRLLRITGVVEHGMFLGMATT
VIVANKDGTVTFLHRKSKLI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgccgccgcctcgccgccgccgtccgggaaggtgtcgcaggacgagctcaag
cgcgtggcggcgcaccgcgcggtggagtttgtggagcccggcatgacgctgggcctcggc
acgggttccacagccgcgcacgcgctggaccgcctgggtgacctcctccgcgcgggcgcg
ctgccgggggtcgccggcgtgcccacctccctcaagacggagctccacgcggcgcgcgtc
gggatcccgctgctcccgctcgacgcggcctcgggcgcccggatccgcctctccattgac
ggcgccgacgaggtcgacccggacctcaacctcgtcaagggccgcggcgggtcgctgctg
cgggagaagatgatcgagggcgccggggagcggttcgtcgtcatcgtcgacgagtccaag
ctcgtgcccaggctcgggtgcacgggcgccgtccccgtcgaggtcatcccattcggcgcg
ccccacacgctgggcctcgtccgcaaggtgttcgacggattgccgggtttccacgccagg
ctcaggacggtcgtggacggcgacctgggttcggcgccgttcgtcactgacaacggcaac
tacatcgtcgagatgttcttcgaggacggcatacgcggcgacctgcaagacatcagcgac
cgcctcctccggatcaccggcgtcgtcgagcacggcatgttcctcggcatggccaccacc
gtcatcgtcgccaacaaggacggcaccgtcacgttcctccacaggaagagtaagcttatt
taa
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