Panicum virgatum (switchgrass): 120683365
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Entry
120683365 CDS
T07260
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120683365
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
120683365
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GFIT
Motif
Pfam:
TPR_AP5Z1_C
SPG48
DUF4172
Motif
Other DBs
NCBI-GeneID:
120683365
NCBI-ProteinID:
XP_039821375
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Position
7N:46471746..46476741
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AA seq
572 aa
AA seq
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MASPELGGGAGSYDFHLRSLSAASRDSAAAADPASDPNLLQSVRRVCEMCREAKDARDEM
VARAFPVMSKLFQRCAAAPIQAVASTGVLLLTILQFFLDFGEAVLHDADGSLKIFFRSCL
SREFADPVVAERTLEFLVANKTKILSSFPTLIPQFYPLLLKLIASNGERLEKKFLEMLPL
MMSAGSFLPLFLSLMDLPMLVVALEKVERSSGTLIGSSIATIQKSAAPEMLLALMDEAYT
GSTIEDSRGNSGSDDSSPLDLADPMFLDLLKDENDGIAAKHWISPTVSSTLQAAVNSPQS
DRLKQSLEMAPRFLSLYFAIALRDVNDSLLCALIPVVMSRYAAMFPDKVFSFEVRKRLSD
FILAAFQRSPDIIAVLKKPITDRLGEAHDNPAKTELALHLCWAIGEHGAGGVNRKDVARE
LFENLELLLYENLATSRLGLSQEPGFDSMGASSRKSSQARLLCFVVTAIAKLATCHSELL
PRARVSLAKVARSRTSDRRVWQRACDYLGLMNEPAICLSVLGSSTAQGNGPGIVNWCEGG
TKMVAHVPFYLLAEQKGPPFHDFSFADLLPAE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccggagctcggcggtggcgccggcagctacgatttccacctccgctcgctc
tccgctgcctcacgggactctgctgcggccgctgaccccgcctccgaccccaacctcctc
caatccgtgaggagggtgtgcgagatgtgccgggaagcgaaggatgcgagggacgagatg
gtggcgcgggcgttcccggtgatgagcaaactgtttcagcgatgcgccgccgctccgatc
caggccgtggcctccaccggcgtgctgcttcttactattctgcaattcttcctggacttt
ggggaggcagtcttgcatgatgctgatggtagtttgaaaatcttcttccgctcttgcttg
agtagggagttcgcggatcctgttgttgcagagcgcacccttgaattccttgtagcaaac
aagacaaagatccttagttcttttcccaccttgattccacagttttatccgttgctgttg
aagctaattgcatcaaatggtgagagactggaaaagaagtttttggaaatgcttccatta
atgatgtcagcggggtcttttcttccgctcttcctgtcccttatggatctaccaatgttg
gtggtggcattggagaaggtggaaagaagttctggaactcttattggtagtagtatagct
acaatccagaagagtgctgctcctgagatgcttcttgcactgatggatgaggcatacact
ggttctacaatagaagattctaggggtaattcaggttctgatgatagtagtcctctagac
ctcgctgatccaatgttcctagaccttctgaaagatgagaatgatggtattgccgcaaaa
cattggatatcccctacagtatcttcaacattacaagcagcagttaacagcccacaatca
gacagattaaaacagtcactggaaatggcacctcgctttctttctttgtattttgcaatt
gcattgcgggatgttaacgattcgctgttgtgtgctcttattccagtagttatgtcaaga
tatgctgcaatgttcccagacaaggttttctcattcgaggttagaaaaagactgtcggat
ttcatattggctgccttccagcggtctcctgacatcattgcagtactgaagaagcctatt
actgacagacttggtgaagctcatgataatcctgcaaagacagaattagcattgcactta
tgctgggccattggcgagcatggagctggaggtgtaaatcgcaaagatgtagctcgtgaa
ctatttgaaaatttggaattgttattgtatgaaaacctggcaaccagtcgtttgggatta
agccaggaaccaggatttgattcgatgggtgcatcttctagaaagtcatcccaagctagg
ctcctctgctttgtggtgaccgccattgcaaaactagcaacatgccacagtgagttgctt
ccgagagcacgtgtatcattggcaaaggttgctcgttcccgaacatcagacaggagagtc
tggcaacgtgcctgtgactatttagggctcatgaatgaaccagccatctgtttatctgta
ctgggatcatccactgcccaaggaaatggacctggtattgttaactggtgcgaaggagga
acaaagatggtagctcatgttcccttttaccttttagcggagcaaaaaggtccaccattt
catgacttttcatttgcggaccttctcccagcagaatga
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