Panicum virgatum (switchgrass): 120683390
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Entry
120683390 CDS
T07260
Name
(RefSeq) endochitinase B-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120683390
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120683390
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Motif
Pfam:
Glyco_hydro_19
Motif
Other DBs
NCBI-GeneID:
120683390
NCBI-ProteinID:
XP_039821402
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Position
7N:complement(35284571..35285750)
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AA seq
236 aa
AA seq
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MASLPRQTTTLTGLALGLVAFLCAAGPCSGSGGASVPSVVTEAFFNGIKSQAGDECEGKN
FYTRGAFLSAAGSFPGFARGGSEGDGKREVAAFFAHATYETGHFCYISEINRANVFCDAS
SRQWPCAPGKKYYGRGPLQLSWNFNYGPAGESIGVDLLRDPDRVAKDPVVSFKAALWSLM
SSAHQAVPRGFGATVGAIDGGLACGGRNPAQVNALVGYYRRYCQQLGVGPGNNLTC
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttaccacggcagacgacgaccctgacgggcttggctctcgggctagtggcg
ttcctctgcgccgccggcccgtgctcggggagcggcggcgcgtccgtgcccagcgtcgtc
accgaggcgttcttcaacggaatcaagtctcaggccggggacgagtgcgagggcaagaac
ttctacacgcggggcgcgttcctgagcgccgccggctcgttcccgggcttcgcgcgcggc
ggctcggagggcgacggcaagcgcgaggtcgccgccttcttcgcgcacgccacgtacgag
accggacacttctgctacatcagcgagatcaaccgggcgaacgtgttctgcgacgcgagc
agcaggcagtggccgtgcgccccggggaagaagtactacgggcgcggcccgctgcagctg
tcgtggaacttcaactacgggccggcgggggagagcatcggcgtcgacctgctgcgggac
ccggaccgggtggcgaaggaccccgtggtctccttcaaggcggcgctctggtccttgatg
agcagcgcgcaccaggccgtgccgcgggggttcggcgccaccgtcggggccatcgacggc
ggcctcgcgtgcggcgggaggaaccccgcccaggtgaacgcgctggtgggctactacagg
cggtactgccagcagctcggcgtcggccccggcaataacctcacctgctag
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