Panicum virgatum (switchgrass): 120683391
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Entry
120683391 CDS
T07260
Name
(RefSeq) endochitinase B-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120683391
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120683391
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Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
120683391
NCBI-ProteinID:
XP_039821403
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All DBs
Position
7N:complement(35281069..35282168)
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AA seq
282 aa
AA seq
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MASSPSPAAVLAVLAIWLALLCAAGIVPAAAQSCGCQPGLCCSKYGYCGTTSAYCGEGCQ
SGPCTGGGGGGGPGPGPGASVASVVTAAFFSGIKSQAGPGCEGAAFYTRAAFLSAASSYP
NFARGGSAADGRREIAAFFAHVAHETGHLCDVNEVGGASMDYCDARDAAWPCAAGQGYYG
RGPLQLSWNFNYGPAGKNIGFDGLADPGMVARDPVVSFKSALWFWMDNVHQLMPQGFGAT
IRAINGAIECNGRNAAEMNQRVDYYRQYCQQLGVDPGSNLTC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcaccgtcgcctgcggcggtcctggcggtgctggccatctggctggcgctc
ctctgcgccgccggcatcgtcccagcggccgcgcagagctgcggctgccagccgggcctg
tgctgcagcaagtacggctactgcggcaccaccagcgcctactgtggcgaagggtgccag
tcgggcccgtgcacggggggcggcggcggcggcggccccggccccggccccggcgcgtcc
gtggcgagcgtcgtcaccgccgcgttcttcagcggcatcaagtcccaggccgggcccggg
tgcgagggcgcagccttctacacgcgggccgcgttcctgagcgccgcgagctcgtacccc
aacttcgcgcgcggcggctccgcggccgacggcaggcgcgagatcgccgccttcttcgcg
cacgtcgcgcacgagaccgggcatctctgcgacgtcaacgaggtcggcggcgcgagcatg
gactactgcgacgcgagagacgcggcgtggccgtgcgccgcggggcagggctactacggc
cgcggcccgctgcagctgtcgtggaacttcaactacgggccggcggggaagaacatcggc
ttcgacgggctggcggaccccggcatggtggcgcgggaccccgtggtgtcgttcaagtcg
gcgctctggttctggatggacaacgtgcaccagctgatgcctcaggggttcggcgccacc
atccgggccatcaacggcgcgatcgagtgcaacgggaggaacgccgccgagatgaaccag
cgtgtggactactacaggcagtactgccagcagctcggcgtcgacccggggagcaacctc
acctgctag
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