Panicum virgatum (switchgrass): 120683394
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Entry
120683394 CDS
T07260
Name
(RefSeq) expansin-B17-like isoform X1
KO
K20628
expansin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
120683394
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Gene cluster
GFIT
Motif
Pfam:
Expansin_C
DPBB_1
EXPB1_D1
PaRep2a
Motif
Other DBs
NCBI-GeneID:
120683394
NCBI-ProteinID:
XP_039821407
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Position
7N:38628768..38633218
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AA seq
282 aa
AA seq
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MASPRSLALFLLCILAAPAPPISAALLFGGGKPAAAAGLDMEWRPATATWYGDAEGDGSD
GGACGYGTLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDRGICSRRAVTVIVTDEC
PGGLCAFGHTHFDLSGAAFSRMAVAGAGGRLRDRGQLNIVYRSVVCLCIYSRTVCKYGGK
NIAFRVNEGSTSFWLSLLVEFEDGEGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLV
GPFSVRLTTLSAKKTLTARDVIPRTWAPKATYTSRLNFEPSL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgcgctccctcgccctcttcctgctctgcattctggctgcgccggcgccg
cccatatcagccgcattgctcttcggcggcgggaagccggccgcggcggcgggcctggac
atggagtggcggccggccaccgcgacgtggtacggcgacgccgagggcgacggcagcgac
ggcggcgcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgcgggtgggg
tcggtgagccccgtgctgttcaaggacggcgagggctgcggcgcctgctacaaggtcaag
tgcctggaccgcggcatctgctcgcgccgggccgtgacggtcatcgtcaccgacgagtgc
cccggcggcctctgcgcgttcggccacacgcacttcgacctcagcggcgccgccttcagc
aggatggccgtcgccggcgccggcggccgcctgcgcgaccggggacagctcaacatcgtc
tacagaagtgtcgtttgtctgtgcatatactccaggactgtctgcaagtacggcgggaag
aacatcgcattccgtgtgaacgagggctcgaccagcttctggctctcgctgctcgtcgag
ttcgaggacggcgaaggcgacattggatccatgcagataaagcaggccaactcggtggag
tggctggacatgaagcacgtgtggggggccacgtggtgcctggtgcggggcccgctcgtg
gggcccttctccgtgaggctgaccacgctgtccgccaagaagacgctcacggcccgggac
gtcatccccaggacctgggcgcccaaggctacctacacctcgcgcctcaacttcgagccg
tccctctag
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