KEGG   Panicum virgatum (switchgrass): 120683515
Entry
120683515         CDS       T07260                                 
Name
(RefSeq) ABC transporter C family member 4-like
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir02010  ABC transporters
pvir04977  Vitamin digestion and absorption
pvir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    120683515
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    120683515
   04981 Folate transport and metabolism
    120683515
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_16 MMR_HSR1 NB-ARC DUF87 AAA_23 Dynamin_N nSTAND1 MeaB ATP_bind_1 FtsK_SpoIIIE T2SSE DUF7072 FKBP_N_2
Other DBs
NCBI-GeneID: 120683515
NCBI-ProteinID: XP_039821527
LinkDB
Position
7N:complement(17957796..17968765)
AA seq 1493 aa
MALPWWLATPACAPPSGSLGLGGWLAFLFLSPCPQRALLGAVDLVFLAASLIFAARRPRS
AKSGTAAAPEREALLQEPKPSPPLFRCALALAASAVFAAASVVLLALALVLLPGTSWRAV
ELAFLAAHAVAHGVAAWTVSSAVRGAGGDAPAAATPPAHLRVFWLVTAVGAALFSASAAV
RSADSSLVFPDDVLAFASLLVSLPLAYVAVTGRDAGAGDGESDRNGAEALAPPYAAASFL
SRATFSWINPLISKGYAAKSLATDDVPGVSAGHRAEASYALFMSNWPAQGSRHPVAVALW
LSFWPQFVLTGALGLTNIAAMYVGPSLIDRFVEFIRRGGTPWEGLRLVLILLAGKTVQTL
TSHHYNFQGQLLGMRIRGALQTALYRKSLRLSTGARRAHGTGAIVNYVQVDAGLVSSAMH
GLHGLWQMPLQIVVALLLLYSYLGAAVLLTLAVIAAATVITAFANKLSLNYQIKFIGVRD
SRIRALTEMLSNIRVIKMQAWEEMFGGRVRELRQAELGWLVKFTLFMCATNVVFSSCPLA
MTVLVFATYLAYGGVLDAGKVFTATSLFNMLSNPMRDFPQTMVSSLQAYVSLGRLNKFLS
ETEIDGTAVDRVEGVDAGAVAVKVQDGVFAWDVPDSEANNGEPGQGEESKMETVLKGIHV
EVRKGELVAVVGMVGSGKSSLLSCIMGEMHKLSGKVSIYGSTAFVGQTAWIRNGTIQENI
LFGNTMHPERYSEVIRACCLEKDLEMMDFGDQTEIGERGINLSGGQKQRIQLARAVYQDC
DIYLLDDIFSAVDAHTGSVIFTECLKGILKNKTVILVTHQVDFLQNVDTVFVMKKGQVIQ
SGTYHELVESCSEFSVLVAAHHSSMEMAEEQGCPVQNTGTSLDTKSRNENGEMTAIAQSK
ETNSSKLIQEEEREIGRVSWHVYKLYMTEAWGWQGVLVLLAMSLLSEGFSMASNYWLSYE
TSGVAISNTSLFLGVYVSIVAATIVFGMISNLVVTFSGLQSAQAFFSKMFDSVLRAPMSF
FDTTPSGRILSRASSDQLKIDIVLVFYIGASLSLCIAVITNVALTCQVAWPSVIAVLPLL
FLNIWYRNHYIVTSRELTRLQGVTEAPVTDHLTETFLGAPTVRCFRKEDEFYQTNLDRIN
SNLRMCFHNYAANEWLGFRLELIGTLILCITAFLMISLPSNFIKKEFVGMSLSYGLSLNS
LVYYTILISCTAENDMVAVERVHQYSTLPSEAAWEVADCLPSPNWPTRGDIDVKDLKVRY
RQNTPLILKGITVSIKSGEKIGVVGRTGSGKSTLVQALFRIVEPTEGRIIIDNVDICTLG
LHDLRSRFGVIPQEPVLFEGTVRSNIDPTGRYSEAEIWQALERCQLKDIVASKPQKLDAL
VADMGENWSVGQKQLLCFGRVILKHSRILFMDEATASVDLQTDAAIQRIIREEFSECTVI
SIAHRIPTVMDSDKVLVLDEGLVREFDAPSKLMGRPSLFGAMVQEHANRSSSM
NT seq 4482 nt   +upstreamnt  +downstreamnt
atggcgcttccctggtggctggccaccccggcgtgcgcgccgccgtcgggctccctcggc
ctcggcggctggctcgcgttccttttcctctccccgtgcccgcagcgcgcgctcctcggc
gccgtggacctcgtattcctcgccgcctccctcatcttcgccgcccgccgcccgcgcagc
gcaaagtcggggacggcggctgcacccgagcgcgaggcgctcctgcaggaaccgaagcct
tcgccgccgctcttccgctgcgctctcgcgctcgcggcctcggccgtgttcgcggcggcg
tccgtcgtcctcctcgcgctcgcgctcgtgctcctgccgggcacgtcgtggcgcgccgtc
gagctcgccttcctcgccgcccacgccgtcgcgcacggcgtggcggcgtggaccgtgtcg
tctgcggtgagaggggcaggaggagatgccccggccgccgccacgcctccggcacatctc
cgcgtgttctggctggtaaccgctgtcggcgccgcgctcttttccgcctcggcggcggtc
cgcagcgccgacagctcgctggtcttcccagatgacgtcctcgccttcgcaagtttgctc
gtctcgctgcctctggcgtacgtggcagtcaccggccgtgacgccggcgctggagatggt
gaatcggaccgcaacggcgcggaggcgctcgccccgccgtacgccgcagcgtcgttcctg
tcgcgcgcgacgttcagctggatcaacccgctaatctccaaggggtacgcagccaagtct
ctcgccaccgatgacgtccccggggtctctgccggccaccgcgccgaggcgtcgtacgct
ctgttcatgtccaactggccggcgcaggggtcgcggcatccggtggccgtcgccctgtgg
ctgtccttctggccgcagttcgtgctcaccggcgcgctcggcctcacgaacatcgcggcc
atgtacgtcggcccgtcgctcatcgaccggttcgtcgagttcatccgccgcggcgggacg
ccatgggagggcctccggctcgtcctcatcctgctcgccggcaagacggtccagacgctg
acgtcgcaccactacaacttccagggacagctcctgggcatgcgcatccgtggcgcgctc
cagacggcgctgtaccgcaagtcgctgcgcctgtccaccggggcgcgccgcgcgcacggc
accggcgccatcgtgaactacgtgcaggtggacgccgggttggtttcctccgccatgcac
gggctccatggcctgtggcagatgccgctgcagatcgtggtggcgctgctcctcctctac
tcctacctcggcgccgccgtgctgctgacgctggccgtgatcgccgcggcgaccgtgatc
accgcgttcgccaacaagctgagcctgaactaccagatcaagttcatcggcgtgcgcgac
agccgcatcagggccctcacagagatgctgagcaacatccgcgtcatcaagatgcaggcc
tgggaggagatgtttggtggcagggtgcgcgagctccggcaggccgagctggggtggctg
gtgaagttcacgctcttcatgtgtgccaccaacgtggtgttctcgagctgcccgctcgcc
atgaccgtgctcgtgttcgcgacgtacctcgcctacggaggggtgctggacgccggcaag
gtgttcacggccacgtccctcttcaacatgctcagcaacccaatgcgggacttcccgcag
acgatggtctcgtccttgcaggcgtacgtgtcgctgggccggctgaacaagttcctgtcg
gagaccgagatcgacggcacggcggtagatcgcgtcgagggcgttgacgctggcgctgtg
gccgtgaaggtgcaggatggcgtgtttgcctgggacgtgccggacagcgaggcaaacaac
ggcgagccgggccaaggggaggagtcaaagatggagacggtgctcaaggggattcacgtg
gaagtcaggaagggtgagctcgtggcggttgttggcatggtgggttccggaaagtcctcg
ctgctgtcctgcatcatgggagagatgcacaagctctcaggcaaggttagcatatatgga
agcacagcatttgttgggcaaactgcctggatacgaaatggaaccattcaagagaacatt
ttatttggaaacacgatgcacccagagagatattcagaagtcatccgtgcatgttgcctt
gaaaaagatttagaaatgatggattttggtgaccagactgaaataggagagcgagggatc
aatctaagtgggggccagaaacaacgcattcagcttgcaagagcagtttatcaagattgc
gatatatatcttcttgatgacatctttagtgcagttgatgctcatacaggatcagttatt
ttcacggaatgtctgaagggtatactcaagaataagactgttattcttgtcactcaccaa
gtggacttcttgcaaaatgtggatacagtatttgtaatgaaaaaagggcaagtcatccag
tctgggacttatcatgaattagtagaatcgtgttcagagttttcggttcttgtcgctgct
catcatagttcaatggagatggccgaagaacaaggttgcccggttcagaacaccgggact
tctctggataccaagtccagaaacgaaaatggtgagatgactgccattgcacagagcaaa
gaaacaaattcctctaagctgatccaggaagaggaaagggaaatcggccgagtcagctgg
catgtgtacaagttatatatgacagaggcctggggttggcagggagttctggtcctttta
gcaatgtcactgctttcagagggcttcagtatggcgagtaactactggctgtcgtatgaa
acatcaggagtcgccatatctaacacttccttatttcttggtgtttatgtttcaatagtt
gctgctacaattgtattcggaatgattagcaatcttgttgtgacattctcgggccttcaa
tcagcccaggcctttttcagcaagatgtttgatagcgttctacgggctccaatgtccttt
tttgacaccactccttcaggaaggatcctaagccgggcatcttcagaccaactgaaaatt
gatattgtccttgtgttttatattggtgcttccctatcattgtgcattgcagtgattacc
aatgttgctcttacttgccaagttgcatggccatcggtcatagcagtacttccgctgctg
tttttgaacatttggtatcggaaccattatattgtaacatctcgagagctaactcgtctt
caaggagtaacagaggcaccagttactgatcacttgactgaaacctttctgggtgctcca
actgtcaggtgctttagaaaggaggatgagttctatcagaccaacttggacagaatcaat
tcgaatttgcgcatgtgttttcataattatgcggccaatgagtggcttggatttcgcttg
gagctaattggtacacttattttgtgtataactgcctttctcatgatcagcttgcccagc
aatttcatcaagaaagaattcgttggcatgtctctctcctatggcctttctctcaattcc
ttggtgtactacacgattctcataagctgtacggccgaaaatgatatggtagctgtagag
agggtacatcagtacagtactctcccttctgaggcagcatgggaggttgcagattgcctt
ccctcaccaaattggcccacccgaggagatattgatgtgaaagatctgaaggttcggtat
cgtcaaaatacacctctaatcttgaaaggtattacagtaagtattaagagcggggaaaag
atcggagttgttggaaggactggcagtggcaagtcgactttagtgcaggccttattcagg
attgtggagcctacagaaggccgtatcattatcgacaatgttgatatctgcactttgggg
cttcatgatctgaggtctcgctttggtgtgattccccaagagcctgtactctttgaagga
actgtgaggagcaacattgacccaactgggcggtattctgaggctgagatatggcaggcc
cttgagcgttgccagctaaaggatatagtagcttcaaaaccccagaagcttgatgcacta
gttgctgacatgggggagaactggagtgtagggcagaagcagctcctctgcttcggccgc
gttatcctgaaacatagtaggatcctcttcatggacgaggcgacagcttctgttgattta
caaacggatgcagcaatccagaggatcatccgagaggagttctccgaatgcactgtcatc
agcattgcacatcgcataccgactgtcatggacagtgataaagttttggtattggatgaa
ggactagtgagagagtttgatgcgccctccaaattaatggggagaccatcgctcttcggt
gcgatggttcaagagcatgcaaatcgctcttctagcatgtag

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