Panicum virgatum (switchgrass): 120683550
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Entry
120683550 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 17-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120683550
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120683550
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GFIT
Motif
Pfam:
K-box
SRF-TF
DUF1192
DUF3731
DUF5070
Ebp2
Motif
Other DBs
NCBI-GeneID:
120683550
NCBI-ProteinID:
XP_039821568
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Position
7N:42662503..42669698
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AA seq
259 aa
AA seq
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MGRGRVELKRIENKINCQVTFSKRRNGLLKKAYELSVLCDAEVALIVFSSRGKLYEFGSA
GVNKTLEKYHNCCYNAQGSNNDFGGEPQSWYQEMSRLKAKLESLQRSQRHMLGEDLGPLS
IKELKQLEKQLEYALSQARQRKVHHTQMMMEQVDELRRKERQLGELNKQLKNKLEAEGCS
HYRAVAVVQTSWATDAAVGSDGGALPAPNAQPPPAAMDCEPTLQIGYHQFVAPEAETMPR
SSTTEGGEQNGHFMLGWAL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaagggtcgagctgaagcggatcgagaacaagatcaactgccaggtgacc
ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctctccgtgctctgcgac
gccgaggtggcgctcatcgtcttctccagccgcggcaagctctacgagttcggcagcgca
ggagtaaacaagacactggaaaagtatcataattgttgttacaatgctcagggttccaac
aatgattttggtggtgaacctcagagttggtaccaagaaatgtcaagactcaaggctaag
cttgaatccctccaacgatctcaaaggcacatgcttggtgaggaccttgggccactgagc
ataaaggagctgaagcaattggaaaaacagcttgaatatgcactatcacaggctcgacag
cggaaggttcatcatactcaaatgatgatggaacaggtggatgagcttcgccgaaaggag
cgccaacttggcgagcttaacaagcaactgaaaaacaagcttgaagcagaaggttgcagc
cactacagggccgtggccgtcgtccaaacctcctgggcaactgacgctgccgtgggttcc
gacggcggtgcactccccgccccaaatgctcaaccgccaccagctgctatggactgtgag
cccactctgcaaatcgggtatcaccagttcgttgcccctgaggcagaaaccatgccaaga
agcagcactactgaaggaggggagcagaacggccacttcatgctcggctgggccctttga
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