Panicum virgatum (switchgrass): 120683712
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Entry
120683712 CDS
T07260
Name
(RefSeq) probable nucleolar protein 5-1
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120683712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120683712
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120683712
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Gene cluster
GFIT
Motif
Pfam:
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120683712
NCBI-ProteinID:
XP_039821739
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Position
7N:complement(33956089..33959048)
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AA seq
372 aa
AA seq
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MVKLESFTLMRRRKKNASIVDSLPCRGLMLLLFETPSGFALFTFNGALCYLPDRMDNLWA
EFGSPSRANMMVFAKGFLSFEDKSRAINGDGVDSELAGLINRWHKPGMNLYVGKPEYRMI
IESVLKIPCRMCCQTVLEIMWGIQQHMGTLVDEEKSKLTKEDRLPMSQGLMKFLSNRGYD
VKPEMVNEKIFLAACALFHCGADDENKLGLLRDAGLYIRDISGIACEDWDILKLAIAVKV
ICCPKELTDFHEVLAEDVVSKLKGDAPKYKGVAVKVCWLSTYHAVVSNHRLRIAKKKMLG
SLVRKAKKAYEAEQAEVCDKVKLHGESQQIAQDHMTSVSSPTMRTVIRRSPRLNRKLHEN
SGEGTPHKRPKY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaattggagtctttcaccttgatgagaaggcgaaaaaaaaatgcctctatagtc
gacagtttgccgtgtcgtgggttaatgttgctgctgtttgagacgccctctggcttcgca
cttttcacttttaatggtgctctatgctacctacctgatcgtatggataatctctgggca
gagtttggaagccccagccgcgcaaatatgatggtttttgcaaagggatttctatctttt
gaggacaaatccagagccatcaatggtgatggtgttgacagcgagcttgctggtctgatc
aacaggtggcacaaacctgggatgaacttgtatgttggaaagcctgagtatagaatgatc
attgaatcagtgttgaaaataccctgccgcatgtgttgtcaaactgtgttggagataatg
tggggcatacaacaacacatgggcacattagtggatgaagaaaaatcaaagctgactaaa
gaggaccgcttaccaatgagtcaaggactaatgaagttcctgagtaatcgtggatatgat
gtcaaaccagagatggtcaatgagaagatttttttggcggcatgcgccttgtttcattgt
ggtgctgatgatgagaataagttaggactcttgcgcgatgctggtctctacattagagat
atttctggcattgcttgtgaggattgggacatactgaagcttgcgatagctgttaaggtg
atatgttgccctaaagaactcaccgattttcatgaggttcttgcagaagatgtggtatca
aagttgaaaggtgatgcacctaaatataaaggtgtcgcagttaaggtctgttggttgagt
acctaccacgcagttgtgtctaaccatcgtctgaggattgcgaagaaaaaaatgttgggg
tccttggttaggaaagctaagaaagcatatgaagcagaacaagcggaagtatgtgacaag
gttaagttgcatggagagtcgcagcaaattgctcaagaccatatgacctctgtgtccagt
cccaccatgagaacagtgatcaggcgcagtccaaggctgaaccgaaagctgcatgagaac
agtggtgagggtactccccataagcggcctaaatactga
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