Panicum virgatum (switchgrass): 120683762
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Entry
120683762 CDS
T07260
Name
(RefSeq) actin-related protein 9 isoform X1
KO
K11673
actin-related protein 8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120683762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120683762
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120683762
INO80 complex (yeast)
120683762
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GFIT
Motif
Pfam:
Actin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
120683762
NCBI-ProteinID:
XP_039821771
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Position
7N:complement(15528088..15556554)
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AA seq
598 aa
AA seq
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MDYLKTVVPSQLMAERGSNLVVINPGSANVRMGFASQDVPFNIPHCIARRINPQEGKEPK
FSVRDQMLNCRASSSQNAERESAYDIIAALMKIPFLDEEMPSLNQPLPPRMGRVDGFSSQ
QSRDDSKFTWTNVTERSIKPSTSIVLPNPPNLPDRSVHKDAEEDTPPSTSGDGNGHDFEE
NKYKEVIFGEDALKIPPSESYCLSRPIRRGHFNVSHNYSLHQVLEDLRTIWNWILTEKLH
INPRDRGLYSAILVLGETFDNREIKEMMSIVLHDLGFSTAVVHQEALAAAFGNGLSTACV
VNIGAQVTQVVCVEDGVALPHTALALPYGGDDISRCLLWVQRRHRTWPNFQTDPVSKPID
MLMLNKIKESYSQIRSGTFDAVTLVHSYDNERSAGHQKTRLSALNVPPMGLLYPRVLVPE
EYPPPPRSWFQDYDDMLEDTWQTSDSLYPSGNGGYGMWDNYPMFPTRLKKFDNIGLVEAI
VSSILSTGRVDLQRKLFCSIQLVGGAASTAGLAPVLEQRILNKIPANQSVERVEVLQSRT
YPLFVPWKGGVILGVLDTGRDAWIHREDWIKNGVHIGSGRKYKDSYFLQAQVMCYYNI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggactacctcaagacggtggtgccgtcgcagcttatggccgagcgcggatctaacctc
gtagtcatcaacccaggatctgcaaacgtgcgcatggggtttgctagtcaggatgtgcca
ttcaatataccacactgtattgcgcgacgcatcaatccacaggagggcaaagagccaaag
ttctctgttcgggatcagatgctcaattgccgtgcttcttcatcacagaatgccgagcgc
gagagtgcatatgatattattgcagcactgatgaaaataccatttttggatgaagaaatg
ccttcactgaaccaaccccttcctccgaggatgggacgtgttgatggcttttcctcacag
caaagtagggatgatagtaaattcacctggacaaatgtgacagagagaagtatcaagcca
tccacatcaattgttttgccgaaccctccaaatttgccagataggtcagtacacaaggat
gctgaggaagatactccgccaagcacatccggtgatggtaatgggcatgactttgaagag
aacaagtacaaggaagtgatatttggagaagatgctttgaaaatccctccatctgagtca
tactgtttgagtcgtcctatcaggagaggccatttcaatgtgtcccataattattcactg
catcaggttttagaagacttacgcactatttggaactggatactgacagaaaagttgcat
atcaacccaagagacagaggtctatattctgcgattcttgttcttggggagacatttgac
aaccgagaaataaaagagatgatgtctattgttctccacgatttggggtttagcacagca
gtggtacatcaggaagctctagctgcagcgtttggaaatggtttgtctacagcttgtgtt
gtcaacattggtgctcaagttacacaagtagtttgtgtagaggatggagtagctttgccc
cacacagcattggcgcttccatatggtggagatgatatctctaggtgcctgctttgggtt
caacgtcgccatcgcacatggccaaactttcaaactgatccagtgagcaagcctatagat
atgctaatgctcaacaaaataaaagagtcatatagtcaaataaggagtgggacgtttgat
gcagttacccttgttcattcatacgataatgaaagatctgctggtcatcagaagacaaga
ctatcagctcttaatgttcctcctatggggcttctttacccaagggttcttgttccagaa
gagtaccctccacctcctcgatcttggttccaagactatgatgacatgctggaagatact
tggcaaacaagtgacagtctttaccctagtgggaatggtgggtatggcatgtgggacaat
tacccgatgtttcccactagattaaagaaatttgataacattggcctcgtagaggccatt
gttagtagcattctttcgacaggacgtgttgaccttcaaaggaagcttttctgtagcatt
cagctggttggtggtgcagcttctacagctggccttgcaccagttctggagcaaaggatt
ctcaataaaattccagcaaaccaatctgttgagagagttgaggtgctgcagtctaggact
tatccgttatttgttccatggaaaggtggagtgattttgggcgtcctggatactggtagg
gatgcttggattcatagagaagattggattaaaaatggtgttcacatagggagtggcaga
aaatataaggattcctactttcttcaggcgcaagtaatgtgctactacaacatatag
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