Panicum virgatum (switchgrass): 120683780
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Entry
120683780 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase BOI-like
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120683780
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120683780
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120683780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF5384
Motif
Other DBs
NCBI-GeneID:
120683780
NCBI-ProteinID:
XP_039821796
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All DBs
Position
7N:27350430..27352060
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AA seq
335 aa
AA seq
DB search
MAVQAQQHLLSHAFLPHHDALGHAFRSLDGAGGVFLDELGIAGCVPAAAAAGPSGDAVFG
GAARSELTCNGGGEYDDGLLLPRKRARVAAGLVECGGQQGGLVLPLAPPPQGQAFAGDVR
ARAVGCGAASPSGRAAASNGVLSQLYHQGVEIDALVRLETERMRVGLQEARRRHARAVVA
AVGRAAAGRLRAAEVELERARCRNAELEERLRQLAAEGQAWMGVARSHEAVAAGLRATLD
QLLQPPACAAALAGSGAADGDAEDAQSCCFETSPPADGAASRGPAPPCRYCGSGDACVLL
LPCRHLCLCRACEPAAEACPVCAATKNASLHVLLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccaggcgcagcagcacctcctctcccacgccttcctcccccaccacgacgcc
ctcggccacgccttccggtcgctcgacggtgccggcggcgtgttcctggacgagctaggc
atcgccggctgcgttccggctgctgccgcggcggggccctccggcgacgccgtgttcggg
ggtgcggcccgcagcgagctcacctgcaacggcggcggcgagtacgacgacgggctcctc
ctcccgaggaagcgggcgcgcgtggcggcgggtctcgttgagtgtggtggccagcagggc
ggcttggtgctgcccctggcgccgccgccgcagggccaggcgttcgccggcgacgtgcgg
gcccgggccgtcgggtgcggcgcggcgtcccccagcggcagggcggcggcgtccaatggc
gtcctctcgcagctctaccaccagggcgtggagatcgacgcgctcgtgagactcgagact
gagaggatgcgggtggggctccaggaggcgcggcgcaggcacgcgcgcgcggtggtcgcc
gccgtgggacgcgccgccgcgggccgcctccgcgcggcggaggtcgagctggaacgcgcc
cgctgccgcaacgcggagctggaggagcgtctgcggcagctggccgccgagggccaggcg
tggatgggcgtcgcccggagccacgaggccgtcgccgcggggctccgcgccacgctggac
cagctcctccagccgcccgcctgcgcagccgccctcgccggatccggcgccgccgacggt
gacgcggaggacgcgcagtcctgctgcttcgagacctccccgcccgccgacggcgcggcg
tcccggggcccggcgccgccctgcaggtactgcggcagcggcgacgcgtgcgtgctgctg
ctcccgtgccggcacctgtgcctctgccgcgcgtgcgagcccgccgccgaggcgtgcccc
gtctgcgccgccaccaagaacgcctccctccacgtcctgctctcctga
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