Panicum virgatum (switchgrass): 120683818
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Entry
120683818 CDS
T07260
Name
(RefSeq) oryzain beta chain-like
KO
K25900
cysteine proteinase RD21 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120683818
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C1: papain family
120683818
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Motif
Pfam:
Peptidase_C1
Inhibitor_I29
Granulin
Peptidase_C1_2
Motif
Other DBs
NCBI-GeneID:
120683818
NCBI-ProteinID:
XP_039821843
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Position
7N:complement(49156408..49159514)
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AA seq
464 aa
AA seq
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MALGRGLLAAAAAAAAFLLLLDAASAALDMSIISYNEEHGARGLERTEAEVRAMYDLWLA
EHGRAYNALGEHDRRFRVFWDNLRFVDAHNARAADHGYRLGMNQFADLTNDEFRAAYLGA
RLPARSDRVVGERYRHDGVEALPEAVDWRTEGAVAPVKNQEQCGSCWAFSAVSTVESINK
LVTGELITLSEQELVECSTNGGNSGCNGGLMDSAFEFIIKNGGIDTEADYPYKAVDGQCD
MNRKNAKVVSIDGYEDVPKNDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGRCTTN
LDHGVVAVGYGTENGKDFWIVRNSWGPKWGEAGYIRMERNIDATSGKCGIAMMASYPTKK
GPNPPKPSPTPPTPPPPVAPENVCDENYSCSAGSTCCCAFGFRSVCLVWGCCPIQGATCC
KDHASCCPPNYPVCNIRARTCSASKNSPLSVPALKRTLATLNTA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctctgggccggggcctgctcgccgccgccgccgcggcggcggccttcctcctgctc
ctcgacgccgcctccgcggcgctcgacatgtccatcatctcctacaacgaggagcacggc
gcgcgggggctggagcggacggaggccgaggtgcgggcgatgtacgacctctggctcgcc
gagcacggccgggcctacaacgcgctcggcgagcacgaccgccgcttccgcgtcttctgg
gacaacctccgcttcgtcgacgcgcacaacgcccgcgctgccgaccacgggtaccgcctc
ggcatgaaccagttcgccgatctgaccaacgacgagttccgcgccgcctacctcggcgcc
aggctccccgcccggagcgaccgcgtggtcggggagaggtaccgccacgacggcgtcgag
gcgctgccggaggccgtcgactggaggaccgagggggccgttgctcccgtcaagaaccag
gaacaatgcggaagttgctgggctttctctgcagtaagcacagttgaaagcattaacaaa
cttgttactggcgagctgatcacattgtcagagcaagaacttgtggagtgctcgaccaat
ggagggaacagtggttgcaatggtggccttatggattccgcctttgagttcatcataaag
aacggaggtattgacactgaagctgactacccttacaaagctgtggatggccaatgcgac
atgaacaggaaaaatgcaaaggttgtgagcatcgatggctatgaagatgtgccgaaaaat
gatgagaaatcactgcagaaggctgttgctcaccagccagtcagcgttgctattgaggct
ggtggccgcgagttccagctctacaaatcgggtgtctttagcggaaggtgcaccacaaac
cttgaccatggtgtggtcgcggtcggttatggcaccgagaatggcaaggacttctggatc
gtccgcaactcatggggtcctaagtggggtgaggctgggtacatccgcatggagcgcaac
atcgatgccacctctgggaagtgtggaattgctatgatggcatcttaccccacgaagaag
ggacccaatcctcccaagccatctccaacccctccaacaccgcctccccctgtcgcccct
gaaaatgtgtgtgacgagaactactcctgctcagcaggcagcacctgctgctgtgctttc
ggcttcaggagtgtgtgcttggtctggggttgctgcccgattcaaggtgctacctgctgc
aaggatcatgccagctgctgcccgccgaactaccctgtgtgcaacatcagggctcggact
tgctcagcgagcaagaacagcccactgagcgtgccggccttgaagcgcaccctcgcgacg
ctcaacaccgcctga
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