Panicum virgatum (switchgrass): 120683888
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Entry
120683888 CDS
T07260
Name
(RefSeq) transcription factor LAF1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120683888
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120683888
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
120683888
NCBI-ProteinID:
XP_039821918
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Position
7N:38875418..38878091
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AA seq
288 aa
AA seq
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MGCKACQKPKAQYRKGLWSPEEDEKLRDFILRYGHGCWSALPAKAGLQRNGKSCRLRWIN
YLRPGLKHGMFSPEEEETVMSLHAKMGNKWSQIARHLPGRTDNEVKNYWNSYLKKRVEGG
AQAKCAADPATPAGSDVRAGSPNPSDSGQRGANRPASSDSSEPVESSSADDSSCLTVTEP
AGAGAAVRPHAPVLPKVMFADWLDMDYGTSLVALGPDAAGVFDASGRSLSHQGSVQVDGP
CGAVDSRHGLGDGGIGWGFNAAADADQMDVQGAGFCDWLSMSEFLGIN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaaggcgtgccagaagcccaaggcgcagtaccggaagggcctgtggtcgccg
gaggaggacgaaaagctccgcgacttcatcctccgctacggccacggctgctggagcgcg
ctccccgccaaggccgggctgcagcgcaacggcaagagctgtaggctgcggtggatcaac
tacctgaggccggggctgaagcacggcatgttctcgccggaggaggaggagaccgtcatg
agcctccacgccaagatgggcaacaagtggtctcagatcgcgcgtcacctgcctggccgg
accgacaacgaggtgaagaactactggaactcgtacctgaagaagcgcgtcgagggcggc
gcgcaggccaagtgcgcggcggacccggcgacgcccgccggctccgacgtccgcgccgga
agccccaaccccagcgacagcggccagagaggcgccaaccggcccgcgagctccgactcg
tcggagccggtggagtcgtcgtcggccgacgactcgagctgcctcaccgtcaccgagccc
gcgggcgcgggcgcggcggtgcggccgcacgcgcccgtgctccccaaggtcatgttcgcg
gactggctcgacatggactacggcaccagcctggtggcgctgggtccggacgccgccggc
gtcttcgacgcgagcgggcgcagcctgagccaccaggggtccgtgcaggtcgacgggccg
tgcggcgcggtggattcccggcacgggctcggcgacggcggcatcggctgggggttcaac
gcggcggcggacgcggatcagatggacgtgcagggagcagggttctgcgattggctctcc
atgagcgagttccttgggatcaactag
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