Panicum virgatum (switchgrass): 120683927
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Entry
120683927 CDS
T07260
Name
(RefSeq) ATPase family AAA domain-containing protein At1g05910-like isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120683927
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
IstB_IS21
nSTAND3
AAA_2
AAA_5
AAA_16
AAA_18
TIP49
AAA_22
AAA_30
RNA_helicase
AAA_14
TTC3_9th
Mg_chelatase
AAA_7
AAA_25
Sigma54_activ_2
NPHP3_N
AAA_33
ABC_tran
PhoH
Parvo_NS1
RuvB_N
AAA_28
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
120683927
NCBI-ProteinID:
XP_039821957
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Position
2K:52116872..52123946
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AA seq
1202 aa
AA seq
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MVAMEGKGDASVTPLRTSDRLRQRPKYYARGYMYYKPAMRKKVKSKKRTAASQIAKKLLR
KPAARPPPADSIAANLRRSTRKRRISVNLEGYDTDSSSMEDDDLMRPRYLSSKSKGENNA
AHDEVSARPKRQKLSNSIPRREGLRPRRSLRGQRLHAYQESEDEQESSEEQGAEDQRENG
NEIEEDVGDDDEVDGGDEAEADGDDEDGEEEQEGRRRYDLRDRSEVRRPSPRKEGKHRPQ
SPRRVLVHGIGPKNSKYLKKGGSRMHKHPRFSLPDDSDDSLLVDEPDEGPSMPWMRSGRG
GMPWLMGGLDMHSPAAWGLNVGASGWGHQGDSSTSLMPGVQTAGPSSKGGADIQPLQVDE
SVSFKDIGGLSEYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALA
CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRS
SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFYFPLPGY
EARAEILDIHTRKWKDPPPKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS
DDKFVIDVDSVSVEKYHFLEAMSTITPAAHRGSIVHSRPLSSVIAPCLKRHLDKIMERIS
DIFPFLSSVDFSKFSALSYGSSIPLVYRPRLLICGGESVGLDHVGPAVLHELEKFSVHSL
GLPSLLSDPSAKTPEEALVHIFGEAKRTTPSILYLPQFHLWWDTAHEQLRAVLLTLLNEL
PSNLPVLLLGTSSVAFTDLEEECASIFSSRNMYQVDQPSYDDRLRYFNILFESLLSFQTE
ESRNKSKKQKSAIDLPKAPKVVEGPKVSELKARAEAEQHAVRRMRMCLRDICNRILFNKR
FNVFHFPVSEEEVPDYRSVIQKPMDMATVLQRVDSGQYLTRAAFMKDIDLIVSNAKTYNG
NDYNGSRIVSRACELRDVVQGMLSQMDPSLVSFCDKIASQGGPLQVMDDEDSSILQAAPV
TQLVSGTRISARLRNVQPEVNLSQSYEVLKRQKKSAENEQVVSGMTKDVAVRGERSPEDV
DLSKPISPEEAPKEPDSNGTLEEADNSPTEAAEIPARPEPMETDSSEVAATVSTGDDLLG
QLEALKQRFMEHTAGYGVPQLERLYSRIMKGVIELTSKESNEDHRRLVVRYLLTFVENSD
NF
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgatggagggaaagggggatgcgtcagtgacgccgttgaggaccagtgaccgg
ctccggcagcgcccaaagtactatgctcgtggctatatgtattacaagccagccatgcgg
aagaaggtcaagtctaagaagcgaacagctgcatcacagattgctaagaaactgcttcgc
aagccagctgcccggccaccacccgccgattccattgcagcaaatttgcgccgttcgacg
cggaagcgaaggatttctgtaaatctggagggctatgatacagatagttcaagtatggaa
gatgatgatcttatgaggcccagatatctttcgtcaaagagtaaaggggaaaacaatgct
gcacatgatgaagtgtcagctcggccaaagcgccagaagttatccaactccatacctcgc
cgtgaaggtttacgacccagaagatctttgcggggacaaaggctgcatgcataccaggaa
tctgaagatgaacaggaaagctctgaagaacagggtgcagaagatcaaagggaaaatggc
aatgagattgaggaggatgtaggtgatgatgatgaggttgatggaggcgatgaagctgaa
gcagacggagatgatgaagatggtgaggaagagcaagaaggaaggaggagatatgattta
agggatcgttcagaggttcgtagaccatcccctcgtaaggaagggaagcacagaccacaa
tctcctcgtagagtactagttcatggaattggtccgaagaacagcaagtatttaaaaaaa
ggtgggtcgcgtatgcataagcaccctcgtttctctttaccagacgattcggatgattcc
cttcttgtggatgagccggatgaaggtccatccatgccatggatgcgtagtgggagggga
ggtatgccatggttgatgggtgggttggacatgcatagtccagcagcatggggtctgaat
gttggagcatctggttggggtcaccagggtgacagttctacttcactcatgcccggggtc
caaactgcgggaccaagttccaaaggtggagctgatattcagcctctgcaggttgatgag
agtgtgagttttaaagatatcggtggactatcagagtacattgatgctttaaaggaaatg
gttttcttccctttgctgtatccagatttttttgcaaactaccacattactccacctaga
ggagttctgctttgtggtccgccgggtactggaaaaacattgattgcccgtgccttagct
tgtgctgcctctaaagccggccagaaggtcagtttttatatgcgcaaaggggctgatgtt
cttagtaaatgggtgggagaggctgaaaggcagctcaagttactttttgaggaagctcaa
aagaatcagccgtctattatattttttgatgaaattgatggcctggcacctgtgaggtct
agcaagcaggagcagattcacaattcaattgtttcaacattacttgctttgatggatggt
cttgattcacgtgggcaagttgtcttgattggagcaactaacagaattgatgccattgat
ggagcattgcgtagacctggccgatttgatcgtgagttttattttcctttacctggctac
gaggctcgagccgaaatactggatattcatacaaggaaatggaaggatcctccaccaaag
gaactaaagatggagcttgctgctagctgtgtgggatattgtggagctgatttgaaagca
ctgtgtactgaagcagctattagagcatttagagagaagtatcctcaggtctacactagc
gatgacaagtttgtcattgatgttgattcggtcagtgttgagaagtaccactttttggaa
gctatgtctacgataactccagctgcgcataggggatccattgtgcattcgaggccactt
tcatcagttattgctccctgtctgaagaggcatcttgataaaataatggaacggatttct
gatattttcccttttctttcatccgtagattttagcaagttttctgccctttcctacgga
tcttccatacctcttgtttatagacctcgccttttgatatgtggtggtgagagtgttgga
ctggatcatgtgggaccagctgttttgcatgaacttgagaagttttctgttcactcgttg
ggactgccttctcttctctctgatccaagtgcaaagacgcctgaagaagctcttgtgcat
atttttggggaagccaagagaacaactccatccattctctacctgcctcagttccatctt
tggtgggatacggcacacgaacagcttagggctgtgttactgactctattgaatgagttg
ccatccaaccttccagttttgttgttaggaacatcatcagtggctttcactgatctcgaa
gaagagtgtgcttccatattctcttctcgcaatatgtaccaagtggatcaaccaagttat
gatgatagattgagatacttcaatatattgtttgagtcattgctctcgttccaaacggag
gaatcaagaaacaagtcaaagaaacagaaatctgctattgatcttcccaaagctccaaag
gtagtggagggccctaaggtttcggagctaaaggctagggcagaagcagagcagcatgct
gtccgtcgaatgaggatgtgcctccgagatatttgtaaccgcattttattcaacaaaagg
ttcaatgtgtttcacttcccagtatcagaagaggaggtacctgactatcgatcagtaatt
caaaagcccatggatatggctactgtcttgcagcgggtggactctggacaataccttacg
agggcagcatttatgaaggatattgatcttattgtctcgaatgcaaagacttataatggg
aacgactacaatggatctaggatcgtcagtagagcatgtgaactccgagatgtggtgcaa
ggtatgttgtcacagatggacccgtctttggtgtccttctgtgataaaatcgcttcacag
gggggaccactgcaggttatggatgatgaagatagctccattcttcaagcagcacctgtt
actcagcttgtttctggtactagaataagtgcaaggcttcgtaatgtgcagccagaagta
aacctctcacaaagttatgaagtgcttaagcggcaaaagaaaagcgcagaaaatgaacag
gttgtttcaggcatgactaaagatgtggctgtaagaggtgaaaggtctccagaagatgta
gatttgtcaaaaccaatttccccagaagaagccccaaaagaaccagattcaaatggcacg
ctagaagaagccgacaattcaccaactgaagcagcagaaatacctgctcgtcctgaaccc
atggagactgacagcagtgaagttgccgccaccgtgagtactggcgacgacttactcgga
cagctagaagccctaaagcagcgctttatggagcacacggcaggttatggtgtgccacag
ctggagaggctgtattcccggataatgaaaggcgtgatagagttgacaagtaaagaaagc
aatgaagatcataggcggttagttgttagatatttgttgacatttgttgagaacagcgac
aatttttaa
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