Panicum virgatum (switchgrass): 120683992
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Entry
120683992 CDS
T07260
Name
(RefSeq) endoplasmic reticulum-Golgi intermediate compartment protein 3-like
KO
K20367
endoplasmic reticulum-Golgi intermediate compartment protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120683992
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120683992
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COPIIcoated_ERV
ERGIC_N
CBP_BcsQ
Motif
Other DBs
NCBI-GeneID:
120683992
NCBI-ProteinID:
XP_039822011
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All DBs
Position
7N:complement(32522245..32527672)
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AA seq
386 aa
AA seq
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MDGLLTKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLR
VDTSRGEMLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDAHGNVIATRQ
DAVGGMKMEKPLQHHGGRLEHNETYCGSCYGAQESDDQCCNTCEDVREAYRKKGWGVSNP
DLLDQCKREGFLQSIKDEEGEGCNIYGFIEVNKVAGNFHFAPGKSFQQSNVHVHDLLPFQ
KDSFNVSHKINKLSFGEYFPGVVNPLDGAQWVQHSSYGMYQYFIKVVPTVYTDINDHIIL
SNQFSVTEHFRSSESGRIQALPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFT
VSGIIDSFVYHGQRAIKKKMEIGKFN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctcctgaccaagctccgcagcctggacgcctaccccaaggtgaacgaggac
ttctacagccgcaccctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc
ctcctcttcgtctccgagctccgattatatcttcatgcagttacagagacaacactaagg
gtggatacctcaaggggtgaaatgcttcgcataaattttgatgtcaccttcccagccctt
cagtgttctataattagccttgatgcaatggacatcagtgggcaagagcaccttgatgtg
aaacatgatatattcaagcaacgaattgatgcccatggcaatgttattgctactagacaa
gatgctgttggtgggatgaagatggaaaagcccttacaacatcatggtgggcggcttgaa
cataatgaaacctattgtggttcttgctatggtgcccaagaatctgatgatcaatgttgt
aacacatgtgaagatgttcgggaagcatacaggaaaaaaggttggggtgtatcgaatcca
gatctgcttgaccagtgcaaaagggagggcttccttcaaagcataaaggatgaagaaggt
gaaggatgcaatatttatggtttcattgaagttaacaaggttgctggcaatttccacttt
gctcctgggaaaagcttccagcagtcaaatgtgcatgtgcacgacttgcttccattccag
aaggacagcttcaatgttagccataagataaataagttaagttttggagaatactttcct
ggtgtggttaatccccttgatggggcgcaatgggtgcagcattcatcatatggaatgtat
caatacttcatcaaggttgttcccactgtctacactgacataaatgatcacatcatcctc
tcaaatcagttctctgtgacggaacattttagaagtagtgaaagtggtcgcatacaagct
cttcctggcgtgtttttcttttatgacctttccccaatcaaggtcacattcacagagcaa
catgtgtcattcttgcacttcttaaccaatgtttgcgcaattgttggtggtgtgttcaca
gtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaagaagatg
gagattggtaaattcaactga
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