KEGG   Panicum virgatum (switchgrass): 120684004
Entry
120684004         CDS       T07260                                 
Name
(RefSeq) importin-9-like
  KO
K20224  importin-9
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120684004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120684004
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120684004
  Pre-60S particles
    120684004
SSDB
Motif
Pfam: HEAT_IPO9_c IBN_N Xpo1 HEAT_EZ HEAT_EF3_N WAPL RIX1 HEAT_2
Other DBs
NCBI-GeneID: 120684004
NCBI-ProteinID: XP_039822021
LinkDB
Position
7N:complement(42913518..42942121)
AA seq 1032 aa
MAAGGAADGDQRWLVECLTATLDTARDVRAFAEESLRQASLLPGYGAALTKVTINKEIPF
GLRQLAAVLLKQFIKQHWQEDEDNFVPPVVSASEKVVIRKLLLTSLDDSHGKIRTAISMA
VAAIGQQDWPEDWPELLPLLLKLISDQNNGNGVRGALRCLALLSDDLDDTCIPKLVPELF
PSLYRIISSPHLYENSLRAKALAIVHSCISMLGSMSGVYKRDTASLMSSMLDPLIEQFSL
ILNSPVQSQNPDDWSMQMEVLKCLLQLVQNFPRLPEAKISAILPSLWQTFVLSFKIYHLS
SIQGSEELDSINYDSDGSERSLESFEIQLFELWTTIVGNSRLAKVIGGNIKELAYYTIAF
QQITEEQVQSWSRDANQYVADEDDVTYSCRVSGSLLLEEVVTAYEDYGINSILEASKMRF
HESQESKQAGSPDWWRLHEASLFALGSLSEQLCEAQDSGFAKYNVQHLLEQMLTDIMATG
VHQYPFLHARALSIVAKFSSVISKEASEQYLSYAARAIASDVPPPVKVGACRTLAQLLPE
SDQDLIQPNVMGILSSLVDLLRQASDETLHLVLETLQSAIKSGGDQSTLIEPIISPIILD
VWAQHIADPFISIDAIEVLEAIKNAPGCLQPLVSRILPTIGSILGKPKIQPDGLVAGSLD
LLTMVLKNAPTVVVKAVFDTCFVSIVQIVLESEDHGEMQNATECLAAFISGGRQELLVWS
GEQGRTLKMLLDAASRLLDPALESSVSLFVGSFILQLILQMPSHLSPYIPDLIAAIVRRM
QTSSIAGLKSSLIVIIARLVHLSVPNVDQFINLLLSIPAQGYDNSLAYIMSVWSQLHGEI
QGAYQIKVTTTALALLISTRHPELSKIEVQGHLIKTSTGITTRSKAQVAPDQWTKIPLPA
KVFSLLADTLAEIQEQIGGGSDDESEEDSDWEEVQNGNTSIADDIIYSASVPSNANLSVE
HLNAMAKVFDEDEDDSYDNDLTKNDPLNEVKLADFLTNIFTNLWENDRPLFEYLCQGPSD
SHRSAVEKVLRK
NT seq 3099 nt   +upstreamnt  +downstreamnt
atggcggccgggggcgcggccgatggcgaccagcggtggctggtggagtgcctgacggcc
acgctagacactgcgcgcgatgtccgcgccttcgccgaggagtcgctccgccaggcctcc
ctccttcccggatacggagctgcccttacaaaagtcacaatcaacaaagaaattccattt
ggtttacgtcagcttgctgctgtcttgctaaagcaattcatcaagcagcattggcaagaa
gatgaagataattttgtgccccctgttgtttccgcttcggaaaaggtggtcatacggaag
ctcctgcttacctcactggatgactctcatgggaagattcgtactgctatcagcatggct
gtagcagctataggccaacaagattggcctgaagactggcctgagttacttcctcttctt
ttgaagttaatcagcgaccaaaacaacgggaatggagttcgtggagcattaagatgccta
gcccttttgtcggatgatctagatgatacatgtattccgaagttagtgccagagctattc
ccgtcactctatagaataatatcatctcctcatctgtatgaaaattctcttcgtgcaaag
gctcttgcgatagtccattcatgtatttccatgctcggatcaatgagtggtgtttataag
agagatacagccagtttgatgagttcgatgcttgatccactaatagagcaattctccctt
attctaaattccccagtgcagtcccaaaatcctgatgactggagcatgcagatggaggtg
ctgaaatgtttacttcagcttgtccagaactttcctagactgcctgaagctaaaatttct
gccattcttccatcactgtggcagacatttgttttgtcgttcaagatctatcacttgtca
tccattcaaggttcggaggaactagattctattaactatgattccgatggtagtgaaaga
agtcttgagtccttcgagattcagttatttgagctctggacaacaattgtggggaattct
agattagcaaaggttattgggggaaacataaaggagctagcatactatacgatagccttt
caacaaataactgaagaacaggtgcaaagctggtctcgtgatgctaaccagtatgttgct
gatgaggatgatgtaacttatagctgtcgtgtgtctgggtctcttttgctggaagaggta
gtaactgcttatgaagattatggaatcaattcaattttggaagcttcaaaaatgcgtttt
catgaatctcaagaatcaaaacaagcaggttctcctgactggtggagactacatgaagca
tcgctttttgctctaggttcactgtcagaacagttgtgtgaagcacaggattctggtttc
gcaaaatacaatgtgcagcatttacttgagcaaatgctaactgacattatggcaacaggg
gtgcatcagtatccatttcttcatgcgcgtgcattatccattgtggctaagttttcttca
gtgataagtaaggaagccagtgaacagtatctaagctatgctgctcgtgcgattgcctca
gatgtgccacccccagttaaagttggcgcttgtaggacactagcccaacttttaccggaa
tctgatcaggatttgattcagcccaacgttatgggcatactctcatctcttgttgatctt
ctgcggcaggcatctgatgaaacactgcatcttgttctagaaaccctccaatcagccatc
aaatctggtggagaccaatcaactttaatcgagcccatcatttcccctatcatactagat
gtttgggctcaacacattgctgacccattcatcagtattgatgctatagaagttctagag
gccatcaagaatgctcctggatgcttacagccacttgtgtctcgaatcctcccaacaatt
ggatccattttagggaaacctaagatccagccggatggactagttgcaggttcgctggac
ctgttgacgatggtactcaaaaatgctccaactgttgtggttaaagcagtctttgacaca
tgctttgtttctattgttcaaattgttcttgaaagtgaagaccatggagagatgcagaat
gcgacagaatgcttggcagcattcatatcaggtggccggcaggagttgcttgtctggagt
ggcgaacaaggacgcacactcaagatgctacttgatgccgcttcaaggctcttagatcca
gcgttagaaagttctgtatcactctttgttggaagcttcatcttgcaactcattttacaa
atgccttcacacttatctccctacataccggatcttattgctgctattgtgagacgaatg
caaacaagcagcattgcaggattgaaaagctcgcttattgttataatagccaggctagta
catctgagtgtaccaaatgttgatcagttcatcaatctcttgctttctatccctgcccag
ggatatgacaattcacttgcttatattatgtcagtgtggtcacaactacatggcgaaatt
cagggagcctaccagataaaggtaacaacaactgcattagctcttctcatttcaactcgt
catcctgagctatctaagattgaagttcaagggcatcttattaagactagtacaggtata
accacacgatcaaaagctcaggtggctcctgatcagtggaccaagattccactaccagct
aaggtcttctcactgttagcagatactttagctgaaattcaggagcagatcggtggtggt
agtgatgatgaaagcgaagaggatagtgattgggaagaagtgcagaatggtaacactagt
attgctgatgatatcatatactcagcatcggttccttcaaatgcgaatctatcagttgaa
catctaaatgctatggctaaagtttttgatgaggatgaggatgacagctatgacaatgat
ctgacaaaaaatgaccctcttaacgaggtgaagttggcagattttctgacaaacatattt
accaacctgtgggagaatgatcgaccactgtttgagtatctttgccagggcccatcagat
tcacacaggtcagctgttgaaaaggttttgaggaagtga

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