Panicum virgatum (switchgrass): 120684004
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Entry
120684004 CDS
T07260
Name
(RefSeq) importin-9-like
KO
K20224
importin-9
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120684004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120684004
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120684004
Pre-60S particles
120684004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_IPO9_c
IBN_N
Xpo1
HEAT_EZ
HEAT_EF3_N
WAPL
RIX1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120684004
NCBI-ProteinID:
XP_039822021
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All DBs
Position
7N:complement(42913518..42942121)
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AA seq
1032 aa
AA seq
DB search
MAAGGAADGDQRWLVECLTATLDTARDVRAFAEESLRQASLLPGYGAALTKVTINKEIPF
GLRQLAAVLLKQFIKQHWQEDEDNFVPPVVSASEKVVIRKLLLTSLDDSHGKIRTAISMA
VAAIGQQDWPEDWPELLPLLLKLISDQNNGNGVRGALRCLALLSDDLDDTCIPKLVPELF
PSLYRIISSPHLYENSLRAKALAIVHSCISMLGSMSGVYKRDTASLMSSMLDPLIEQFSL
ILNSPVQSQNPDDWSMQMEVLKCLLQLVQNFPRLPEAKISAILPSLWQTFVLSFKIYHLS
SIQGSEELDSINYDSDGSERSLESFEIQLFELWTTIVGNSRLAKVIGGNIKELAYYTIAF
QQITEEQVQSWSRDANQYVADEDDVTYSCRVSGSLLLEEVVTAYEDYGINSILEASKMRF
HESQESKQAGSPDWWRLHEASLFALGSLSEQLCEAQDSGFAKYNVQHLLEQMLTDIMATG
VHQYPFLHARALSIVAKFSSVISKEASEQYLSYAARAIASDVPPPVKVGACRTLAQLLPE
SDQDLIQPNVMGILSSLVDLLRQASDETLHLVLETLQSAIKSGGDQSTLIEPIISPIILD
VWAQHIADPFISIDAIEVLEAIKNAPGCLQPLVSRILPTIGSILGKPKIQPDGLVAGSLD
LLTMVLKNAPTVVVKAVFDTCFVSIVQIVLESEDHGEMQNATECLAAFISGGRQELLVWS
GEQGRTLKMLLDAASRLLDPALESSVSLFVGSFILQLILQMPSHLSPYIPDLIAAIVRRM
QTSSIAGLKSSLIVIIARLVHLSVPNVDQFINLLLSIPAQGYDNSLAYIMSVWSQLHGEI
QGAYQIKVTTTALALLISTRHPELSKIEVQGHLIKTSTGITTRSKAQVAPDQWTKIPLPA
KVFSLLADTLAEIQEQIGGGSDDESEEDSDWEEVQNGNTSIADDIIYSASVPSNANLSVE
HLNAMAKVFDEDEDDSYDNDLTKNDPLNEVKLADFLTNIFTNLWENDRPLFEYLCQGPSD
SHRSAVEKVLRK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggggcgcggccgatggcgaccagcggtggctggtggagtgcctgacggcc
acgctagacactgcgcgcgatgtccgcgccttcgccgaggagtcgctccgccaggcctcc
ctccttcccggatacggagctgcccttacaaaagtcacaatcaacaaagaaattccattt
ggtttacgtcagcttgctgctgtcttgctaaagcaattcatcaagcagcattggcaagaa
gatgaagataattttgtgccccctgttgtttccgcttcggaaaaggtggtcatacggaag
ctcctgcttacctcactggatgactctcatgggaagattcgtactgctatcagcatggct
gtagcagctataggccaacaagattggcctgaagactggcctgagttacttcctcttctt
ttgaagttaatcagcgaccaaaacaacgggaatggagttcgtggagcattaagatgccta
gcccttttgtcggatgatctagatgatacatgtattccgaagttagtgccagagctattc
ccgtcactctatagaataatatcatctcctcatctgtatgaaaattctcttcgtgcaaag
gctcttgcgatagtccattcatgtatttccatgctcggatcaatgagtggtgtttataag
agagatacagccagtttgatgagttcgatgcttgatccactaatagagcaattctccctt
attctaaattccccagtgcagtcccaaaatcctgatgactggagcatgcagatggaggtg
ctgaaatgtttacttcagcttgtccagaactttcctagactgcctgaagctaaaatttct
gccattcttccatcactgtggcagacatttgttttgtcgttcaagatctatcacttgtca
tccattcaaggttcggaggaactagattctattaactatgattccgatggtagtgaaaga
agtcttgagtccttcgagattcagttatttgagctctggacaacaattgtggggaattct
agattagcaaaggttattgggggaaacataaaggagctagcatactatacgatagccttt
caacaaataactgaagaacaggtgcaaagctggtctcgtgatgctaaccagtatgttgct
gatgaggatgatgtaacttatagctgtcgtgtgtctgggtctcttttgctggaagaggta
gtaactgcttatgaagattatggaatcaattcaattttggaagcttcaaaaatgcgtttt
catgaatctcaagaatcaaaacaagcaggttctcctgactggtggagactacatgaagca
tcgctttttgctctaggttcactgtcagaacagttgtgtgaagcacaggattctggtttc
gcaaaatacaatgtgcagcatttacttgagcaaatgctaactgacattatggcaacaggg
gtgcatcagtatccatttcttcatgcgcgtgcattatccattgtggctaagttttcttca
gtgataagtaaggaagccagtgaacagtatctaagctatgctgctcgtgcgattgcctca
gatgtgccacccccagttaaagttggcgcttgtaggacactagcccaacttttaccggaa
tctgatcaggatttgattcagcccaacgttatgggcatactctcatctcttgttgatctt
ctgcggcaggcatctgatgaaacactgcatcttgttctagaaaccctccaatcagccatc
aaatctggtggagaccaatcaactttaatcgagcccatcatttcccctatcatactagat
gtttgggctcaacacattgctgacccattcatcagtattgatgctatagaagttctagag
gccatcaagaatgctcctggatgcttacagccacttgtgtctcgaatcctcccaacaatt
ggatccattttagggaaacctaagatccagccggatggactagttgcaggttcgctggac
ctgttgacgatggtactcaaaaatgctccaactgttgtggttaaagcagtctttgacaca
tgctttgtttctattgttcaaattgttcttgaaagtgaagaccatggagagatgcagaat
gcgacagaatgcttggcagcattcatatcaggtggccggcaggagttgcttgtctggagt
ggcgaacaaggacgcacactcaagatgctacttgatgccgcttcaaggctcttagatcca
gcgttagaaagttctgtatcactctttgttggaagcttcatcttgcaactcattttacaa
atgccttcacacttatctccctacataccggatcttattgctgctattgtgagacgaatg
caaacaagcagcattgcaggattgaaaagctcgcttattgttataatagccaggctagta
catctgagtgtaccaaatgttgatcagttcatcaatctcttgctttctatccctgcccag
ggatatgacaattcacttgcttatattatgtcagtgtggtcacaactacatggcgaaatt
cagggagcctaccagataaaggtaacaacaactgcattagctcttctcatttcaactcgt
catcctgagctatctaagattgaagttcaagggcatcttattaagactagtacaggtata
accacacgatcaaaagctcaggtggctcctgatcagtggaccaagattccactaccagct
aaggtcttctcactgttagcagatactttagctgaaattcaggagcagatcggtggtggt
agtgatgatgaaagcgaagaggatagtgattgggaagaagtgcagaatggtaacactagt
attgctgatgatatcatatactcagcatcggttccttcaaatgcgaatctatcagttgaa
catctaaatgctatggctaaagtttttgatgaggatgaggatgacagctatgacaatgat
ctgacaaaaaatgaccctcttaacgaggtgaagttggcagattttctgacaaacatattt
accaacctgtgggagaatgatcgaccactgtttgagtatctttgccagggcccatcagat
tcacacaggtcagctgttgaaaaggttttgaggaagtga
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