Panicum virgatum (switchgrass): 120684071
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Entry
120684071 CDS
T07260
Name
(RefSeq) 3beta-hydroxysteroid- dehydrogenase/decarboxylase-like
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00100
Steroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120684071
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
120684071
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Motif
Pfam:
3Beta_HSD
Reticulon
Epimerase
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
120684071
NCBI-ProteinID:
XP_039822109
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Position
2K:complement(52243216..52247610)
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AA seq
563 aa
AA seq
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MATAEAGPTTGKPACAVTFGRSTLLGRHLAAALAASGRWSAVAVLDPSPSPPPPPASPLV
RHHAVDLSDPARLASALAGAAAVFHVDATTAAAPGSDGSFLSLHRLAAEGTRRLLAACRA
AGVGRVVYTGSADVVAAGPRDVVNADEDSVSYPDKFGNAVSELRAQVEMMVLSADGVRTC
VLRPSNLFGPGDSSLVRFVAGYARSPLGKFVIGGGGNMSDFTCVENVAHANICAEQALCT
NAASVAGKPFFVTNGEPMETWEFMNCIIEAMGFQRPRINLPAKMLLFVSLFSNMIHHRLG
FQMFSTPLLHPDTIYFLSRTRIFNTSKARKLLGCYPIVSLEDGIMRTVGSFSELSDNLGF
SRKQRSCGPSKADKLLGSGTAADILLWRDEKRTFSFVTVLFLLFYWFLLSDRTFVSSAAK
FLLVISLALFIHGVLPSQVFGFTIEKVTSDHFELSHSALRNSLMCLAYAWNGSIHKLRVL
AEGEDWSTLLKVFAFLYSVKLLLNFQFRVLMGLVLASLFIVFIVYEQCEEEIDSLVSNAS
VKIKWLMDRVVDRLPASLKTYIS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgaggccggcccgaccacgggcaagcccgcctgcgccgttaccttcggc
cgctccaccctcctcggccgccacctcgccgccgcgctcgccgcctccggccgctggtcg
gccgtcgccgtcctcgacccttccccttcccctcccccaccgccggcctcccccctagtc
cgccaccacgccgtcgacctctccgaccccgcgcgactcgcctccgcgctcgccggcgcc
gcggccgtcttccatgtggacgcgacgacggcagccgcccccgggagcgacgggtccttc
ctctccctccaccgcctcgctgccgagggcacgaggcggctcctcgcggcctgccgcgcg
gccggcgtggggagggttgtgtacaccggctcggccgacgtggtggccgccggcccccgg
gatgtagtcaatgccgacgaggactccgtgtcctaccctgacaagtttgggaacgcagtg
agcgagctgagggcgcaggtggagatgatggtgctgagtgcggacggggtgcggacgtgc
gtgctgcgcccaagcaatctgttcgggcctggcgattcgagcctggtgcggtttgttgct
ggatatgcaaggtctcccttgggcaagtttgtaataggtggtggcggtaacatgtctgac
tttacctgtgtggaaaatgtggcccatgccaatatttgtgctgagcaagccttgtgtaca
aatgcagcttctgttgctgggaagcctttttttgttaccaatggtgaacctatggaaaca
tgggagtttatgaactgcataattgaagctatgggttttcagaggcccaggattaatctt
cctgccaagatgttattgtttgtgtccttgttctccaatatgattcatcacaggcttggt
tttcaaatgttttcaactcctcttctgcatccagatacaatatacttcttgtcacgcaca
agaatttttaacacttcaaaagctagaaaattacttgggtgctacccaattgtatcattg
gaggatggaattatgagaactgtggggtcattttcagaattatcagataatttgggcttc
tcaaggaagcaacgctcctgtggaccatcgaaggcagataagctgctaggaagtggaaca
gctgctgatattcttctttggagggatgaaaagagaaccttttcatttgtgacagtattg
ttcctgcttttctactggttcctgctttcagacagaacttttgtctcgtcggctgccaaa
tttcttctagtgatttcccttgctcttttcatccatggtgtactgccttcacaagtcttt
ggttttacaattgagaaggttacctctgatcattttgaattatcacactcagcattgagg
aattcacttatgtgcctggcttatgcatggaatggaagcattcataaactgagggttcta
gcagaaggtgaagactggagtacccttttaaaggtatttgcatttttgtacagtgtcaag
ctattgttgaactttcaattcagagtgctgatgggtcttgtattggcatccttgttcatc
gtcttcattgtctacgaacaatgcgaggaagaaattgacagcttggtgtcaaatgcttct
gtcaaaatcaagtggctaatggacagagtagtcgatcgtttgccggcttctttgaagaca
tatatatcctag
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