Panicum virgatum (switchgrass): 120684439
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Entry
120684439 CDS
T07260
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120684439
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120684439
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120684439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120684439
NCBI-ProteinID:
XP_039822235
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All DBs
Position
8N:37720611..37722047
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AA seq
359 aa
AA seq
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MAVQARFGGGLTGCLPLCGGGGGLAEDQMLALRDYGGALLPLPPAAAAGNKAYQYNCAAG
VVSGAQSELTCNGGGVAVPSRKRGREDALDQYVASSSAAALLPIPGTQRAVVARHSPSAA
AAFASRMAESATASTSRRPAPAAVVAEALAAELCRQGAEVDALVRAECERLRAGLEQARE
RQRQALARAAEAGAARALRAREAELGAARRRAAELEERLRQAAAEGQAWCGLARSNEAVA
AGLRAALDALLLRGAGAGAAPAQAAEEGFGESSGAAPAAAADDAQSRCLVEAEAEDAAAA
ATSATAASRWTCRACGGGEASVLLLPCRHLCLCKACEPRAEACPVCLAPKSASIHVAAM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcaggcgcggttcgggggcggcctcaccgggtgcctgccgctctgcggcggc
ggcggcggattggccgaggaccagatgctagcgctcagggactacggtggcgcgctcctg
ccactgccgccagccgccgccgcgggcaacaaggcgtaccagtacaactgcgccgccggc
gtggtcagcggcgcgcagagcgagctgacgtgcaacggcggcggggtggcggtgccgtcg
cggaagcgcgggagggaggatgcgctcgaccagtacgtggcgtcctcgtcggcggcggcg
ctgctgccgatcccggggacgcagagggcggtcgtggcgcgtcactctccctcggcggcg
gcggcgttcgcgagccggatggcggagtccgcgacggcgtcgacgagcaggcggccggcg
ccggccgccgtggtggcggaagcgctggcggcggagctgtgccggcagggcgcggaggtg
gacgcgctggtgcgcgccgagtgcgagcggctgcgcgccgggctggagcaggcgcgggag
cggcagcgccaggcgctggcgcgcgccgccgaggcgggcgcggcgcgcgcgctgcgggcg
agggaggccgagctgggcgcggcgcggcggcgcgcggccgagctcgaggagcggctgcgg
caggcggccgccgagggccaggcgtggtgcggcctggcccgcagcaacgaggccgtcgcc
gcggggctccgcgccgcgctcgacgcactcctcctccgtggcgccggcgccggagccgcc
ccggcgcaggccgccgaggagggcttcggcgagtcctccggcgccgcccctgccgcggcg
gcggacgacgcgcagtcccgatgcctcgtcgaggccgaggccgaggacgccgccgccgcg
gccacgtcggccaccgcggcgagcaggtggacgtgccgggcgtgcggcggcggcgaggcg
tcggtgctgctgctgccgtgccggcacctgtgcctgtgcaaggcgtgcgagccccgggcg
gaggcctgccccgtctgcctggcgcccaagagcgcgtccatccacgtcgccgccatgtga
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