Panicum virgatum (switchgrass): 120684501
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Entry
120684501 CDS
T07260
Name
(RefSeq) two-component response regulator-like APRR3 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120684501
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
DUF5000
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120684501
NCBI-ProteinID:
XP_039822282
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Position
8N:2773558..2779590
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AA seq
691 aa
AA seq
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MSPDADAGGGAAAAGGGGGGEAAGASSSPASAAAARWDQILPRRSLRVLLVEHDDSTRQV
VTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLSGIQLLARIVAADECK
NIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTYLSENN
AASNHISANVANGSKAGENSDEESDAQSFGSKRDTEIQSVEKLPDTRADEGADPSRKSKL
QNESYDGVNTKYHVSKDSDDAPSGSEKNVRSKGLNGITSAKVAEQIMDNALRIADASSRR
PSNLGKDLAMAQPTADGQCKSSVMERNAPTGSNLGEKSKGAAISHAKSCPPQFLETNLGK
QHHLSGYKTQEFREKDIFNHSNSSAFSRYGNKRIEPSAEHQFFPSLCITRQEPVHDKDPV
SQPSGVLPPHEHNTGESTRQARIPLDSSTEGAAVLCSSSAREDPGASSSSHRQDSMSHPS
YGFIPLPIPVGAAMPYHYGVILQPVYYPQAPRMHCDSAGINKATIQHSSGQSKYHENRNI
PSQVDEHRQSEENQQLHHSRQILRESGELIDLARAHVEHVNQSASCSQDVRKGSVCTGSG
EADINTNTMVALESGNESGVQNCYNNGLDSDRSRRDAALMKFRMKRKDRCFEKKVRYHSR
KKLAEQRPRVKGQFVSQKLKSATTADAETDS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgacgcggacgccggcggtggggccgcggctgccggcgggggagggggcggg
gaggctgccggcgcgtcgtcgtcccccgcgtccgcggcggcggcgcggtgggaccagatc
ctcccgcgccgctcgctccgcgtcctcctcgtcgagcacgacgactccacgcgccaggtc
gtcaccgcgctcctccgcaagtgcggctaccgcgtggccgcggtcgccgacgggatgaag
gcgtgggaggtcatgcgggggcgcgcctacgccttcgacctcgtgctcaccgaggtcgcc
atgccctcgctctccggcatccagctgctcgccaggatcgtcgccgccgacgagtgcaag
aacatcccagtcatcatgatgtcgtcacaagattctattggtacggtgctcaagtgcatg
cagaagggtgcagtggacttccttgtaaaaccagtgagaaagaatgagctgcgtaactta
tggcagcatgtatggaggcggcatgcaatgaatagccaaacatatttatcggaaaataat
gcagccagcaatcatataagtgccaatgttgctaatggttcaaaggcaggggaaaacagc
gatgaggaaagtgatgcccaaagctttggtagcaagagggatactgaaattcagagtgtt
gagaagttgccagatactcgtgcagatgaaggggctgatccctccagaaaaagtaaacta
caaaatgagtcttacgatggagtaaacacaaagtatcatgtgtcaaaagatagcgatgat
gccccaagtggaagtgagaagaatgtgcgttcgaaaggccttaatggtattacttcagcc
aaggttgctgagcaaataatggataatgccttgaggattgctgatgcaagttcacgtcga
ccaagcaatcttggcaaagacttggctatggcccaaccaacagctgatggacaatgtaaa
tcttcagtcatggaacgaaatgctcccacaggaagtaaccttggtgaaaaatcaaagggt
gctgcaataagtcatgctaaatcttgtccgccccaatttctagagaccaacttaggaaag
caacaccatcttagtggttacaaaacccaagagttcagggaaaaagatatcttcaatcac
tcgaattcctctgccttttcaagatatggcaataaaaggatagagccgtcagctgagcac
cagtttttcccttctctctgcataactcgtcaagaacctgttcatgacaaggacccagtt
tcccaacccagtggggtgttacctccccatgaacataatacaggtgagagtacaaggcaa
gctcggattcctttggacagtagcacagagggagctgctgtactgtgttccagtagtgct
agagaagatccaggtgcaagcagttcctcccatagacaggacagtatgagccatccttca
tatgggttcatacctcttccaattcctgttggtgctgcgatgccttaccattatggtgta
attctgcagccagtatactacccgcaggctcctcgtatgcattgtgattcagctggcatc
aacaaggcaactattcagcactcctctggtcaatcgaaataccatgaaaatcgtaatata
ccttctcaggttgatgaacacagacagtcggaggaaaatcagcagttgcatcattcaaga
caaattctcagagaatcaggagaactaattgacttggcgagagctcatgtggagcacgtc
aaccagagtgctagctgcagccaggatgtacgtaaaggaagtgtatgcaccggtagcggc
gaagctgacattaatacaaatacaatggttgccctagaaagtggtaacgaaagtggtgtc
cagaactgctataataatgggttggatagtgaccggtctcgccgtgatgctgccttgatg
aagtttcgcatgaaaaggaaagatagatgcttcgaaaaaaaggttagatatcatagcagg
aaaaagcttgcagagcaaagaccaagagttaaggggcagtttgtgagccaaaagctgaaa
tcagctacaacagcggatgcggaaactgactcatga
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