Panicum virgatum (switchgrass): 120684522
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Entry
120684522 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120684522 isoform X1
KO
K03505
DNA polymerase delta subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
pvir03410
Base excision repair
pvir03420
Nucleotide excision repair
pvir03430
Mismatch repair
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120684522
03410 Base excision repair
120684522
03420 Nucleotide excision repair
120684522
03430 Mismatch repair
120684522
03440 Homologous recombination
120684522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120684522
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120684522
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120684522
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120684522
MMR (mismatch excision repair)
DNA polymerase delta complex
120684522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Motif
Other DBs
NCBI-GeneID:
120684522
NCBI-ProteinID:
XP_039822313
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All DBs
Position
2K:complement(52677129..52679299)
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AA seq
184 aa
AA seq
DB search
MWPWSMMIHDAFCKDGSAFLFSVLYFQSLRSTPVSSIKVYACREFRSIRTEELTNMASSG
MKDFYRQKKKGGVTKAASPSNKKTKQYTVGASVGAPDTAQTSALVSHGSWDLKDDFGEQE
EQLRQYDLDMKFGPCIGVTRLQRWERASAMGLQPPAHLRDLLLRVPSTKDRSDPYVGCLW
EGKV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtggccatggtcaatgatgatacatgatgctttctgcaaagatggtagtgctttcttg
ttttctgttttgtatttccagagcctcaggtctactcctgtgtctagcatcaaggtgtat
gcttgcagggagttcagatcgataaggactgaagaattgacaaacatggcatctagtggc
atgaaagatttttaccggcagaaaaagaaaggaggtgtgaccaaggcggcatcaccttcc
aataagaaaacaaagcagtacactgtcggggcctccgtcggggccccagatactgctcag
acatcagcacttgtttctcatggctcctgggatctcaaagatgattttggtgagcaagag
gagcagctgcggcaatacgacttggacatgaagtttggcccatgtattggtgtcacccgg
cttcagcgctgggagcgcgcttctgccatgggcctccagccaccagcccatctccgggat
ctcttgctgcgtgttccatcaacgaaggatcgcagtgatccttatgtcgggtgcctatgg
gagggtaaagtctag
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