Panicum virgatum (switchgrass): 120684563
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Entry
120684563 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit C-4-like
KO
K08066
nuclear transcription factor Y, gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120684563
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120684563
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GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
CENP-X
Motif
Other DBs
NCBI-GeneID:
120684563
NCBI-ProteinID:
XP_039822346
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Position
8N:13760941..13761738
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AA seq
202 aa
AA seq
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MSSGSKGGAGRPQELHGSAPTPLPSLQPQELDEFWRKIIVEIENMVNLNNHTIPMSSVVE
IIREHQGGLMMSSEAPPVVTKVLEIFIQELTVRASMCAKSHGRSSILESDIYEAINSGES
YVCLNNVLRRAVTNHDQASMSSNAPQLQQEPHLVAATSRLIDNGPTDHPYKSGEEATQIS
AEEPDEDLNLPTTSSGDTEETK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggatcaaaaggaggagctggacgtccacaagagttgcatggatctgcacca
acaccattgccatcactgcaaccacaagaacttgatgagttctggaggaagatcattgtg
gaaattgagaacatggtgaacttgaacaatcacactataccaatgagctctgttgtagaa
atcattagagagcaccaaggtggcttaatgatgtcatctgaggcaccaccagtcgtcaca
aaggtcctggagatattcatccaagaacttacggttcgtgcctcgatgtgtgccaaatcc
catggccgctccagcatacttgaatcagatatctatgaggccattaattctggtgagtcc
tatgtctgcctgaataatgttctgcgaagggctgtgacaaatcatgatcaggcatccatg
tccagcaacgcgccccagctacaacaggaacctcatcttgttgcagcaacttccagactg
atagataatggtccaaccgatcatccgtacaaatcaggggaagaagctacccaaatcagc
gctgaagaacctgatgaagatctcaacctgccgactacctcaagtggggatactgaagaa
actaaataa
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