Panicum virgatum (switchgrass): 120684635
Help
Entry
120684635 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120684635 isoform X1
KO
K17925
sorting nexin-13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120684635
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120684635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
120684635
NCBI-ProteinID:
XP_039822449
LinkDB
All DBs
Position
8N:complement(2834251..2842475)
Genome browser
AA seq
1035 aa
AA seq
DB search
MRKRMESVDDLIEEAKLRTVGWALCVFAISYFLTHTSKSMWTNVPMSILILAFLRYLSFK
VEFRWREQPARKHTYLSQVSKKQLSANDHRLSTVLPVSRWRRKVGSPSVEAAFESFTDNI
LRDFVLDLWYSDITPDREAPELICGLILHGLGELSGRVKEMNLVDLLTRDMVDLIGDHLD
IFRKNQAVIGADVMRTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVLQEIVGGIMAL
VLRPQDAQSPLVRCFSRELMTCLVLQPVMNFASPIYMNELIVYLLNNNDTSNVGGNANMA
NTGTVTVMHDHPSYKGGSQGSQKESRNLALEPSGLVPGNNSGMRTLVTSEGGKSKVLQDD
HDSAIQPRQPNWAVVLDAATKRRSEVLAPENLENMWAIGRNYQKKMIKADHSSRLKGSGG
LDNSPRTVAVAKELSSNFNERIASVDDKYMVTMMHSTNRNVQSTFVTGSHPLALQNKNEV
KPKEVNQVSYSSKEKTHETSNIAKDQLKRSSSTPDIEKRYLAKSNQPMVSSESGNARKNQ
DDKVSGLTSHVEVLLHVPKIRCRVVGAYFEKLGSKSFAVYSIAVTDADNKTWFVKRRYRN
FERLHRQLKEIPNYSLHLPPKSFLSSSVDDYLVHQRCILLDKYLQDLLSIANIAEQHEVW
DFLSASSKNYSAGKSTSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTSPSSATAEFI
DNRMYLPWNQEETDNHNVHHKNLERVHSLSDGDSNYEDLTSSVNSGCHSDNEVNNKGHTS
NDIKQIETHASFDSQMSEQIQKPVRAYSDSSNMSSPNTFEDPTGIPPEWMPTNVSVPLLN
LVEKVFQLKRRGWIRRQVLWISKQILQLVMEDAIDEWIIRQINWLRREDFIVQVIRWIQD
TLWPNGIFFTKLDGYKGNGGGSSQFDKQSSGTGSGKKSGASSFEFQLEASRNASEVKKLL
LDGTPSTLVSIIGYKQYRRSARDMYYFLQSNVCVKQLSYAMLEQVIVTIFPELRQLINDI
HEKGRKEQASFTHHL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaggatggagagcgtggacgatctgatcgaggaggccaagctgcgcaccgtg
gggtgggcgctctgcgtcttcgccatctcctacttcctcacgcatacaagcaaatcaatg
tggacaaatgtgcccatgtcgatccttatacttgcatttctccgatatctctccttcaaa
gtggagttccgttggagggaacagcctgcacggaagcatacatatttgtctcaagtgtca
aagaaacagttatctgctaatgatcatcgtctttcaactgtgctgccggtttcaagatgg
agaaggaaagttggctcaccttccgttgaggctgcttttgaaagtttcactgacaatatt
ttgagggactttgttttagacttgtggtattcagatattactcctgacagagaggcccca
gaactgatatgtggcttaatacttcatggtcttggtgaattatcaggcagggtgaaagag
atgaatctagttgacttgctaacaagggatatggttgatttgattggtgaccatttagat
atttttcggaagaatcaagctgtaattggtgctgatgttatgaggacgttgtcttccgag
gaaagagatgagagactgaagcagcacctaattgtttcacaggaacttcatccagcactg
ttatcttcagagcacgagtacaaggttcttcaagaaattgtggggggcattatggctcta
gttttaagaccacaagatgctcagagtccactagttcgctgtttctccagggaactcatg
acctgccttgtcttgcagccagtgatgaactttgcaagtccaatctatatgaacgagttg
attgtctaccttctaaacaacaatgacacgagcaatgtaggaggcaatgcaaacatggct
aatactggaactgtgacggtaatgcatgatcatccatcttacaaaggcggttcgcaaggt
tcccaaaaggaatcgaggaatttggctttagaaccaagtggcttagttccaggaaataat
tctggcatgaggacacttgttacttctgaaggtggaaagtcaaaagtgttgcaggatgac
catgacagtgccatccagcctcgtcagccaaactgggcagtggtattggatgcagctact
aaaagaagatcagaggttcttgcccctgagaatcttgagaacatgtgggcaataggaaga
aattaccaaaagaaaatgattaaagcagaccattcatcaagattgaaaggttctggtggt
ttagataacagtccaaggactgtggcagtggctaaagagctatcctctaacttcaatgag
agaattgcatctgttgatgataaatacatggtgaccatgatgcatagtacaaataggaat
gttcagtccacgtttgtcacaggcagtcatccgcttgctttacaaaataagaatgaagtg
aaaccaaaagaggtgaatcaagttagttacagcagcaaggaaaaaacacatgaaaccagc
aacattgcaaaagatcaactaaagcggtctagtagtactcctgatattgagaaaagatat
ttggccaaaagtaaccaacccatggtttctagtgaaagtggaaatgcaaggaaaaatcag
gatgataaggtttctggtcttacctctcatgttgaggtactgttgcatgttccaaagata
agatgcagggttgtcggtgcatatttcgagaaactaggttcaaaatcttttgcagtttat
tctattgctgtgactgatgcagataacaagacctggtttgtgaaaagaagataccgaaat
tttgaacgtcttcatcgacagctgaaggagatacctaattattcattgcatctacctcca
aagagttttctttcatctagtgttgatgattaccttgtgcaccaacgatgcattctcctg
gacaagtatcttcaagatctcttgtctatagctaacattgcagaacaacatgaagtttgg
gattttcttagtgcatcatcaaagaattactctgcaggaaagtccacctctgttatgaaa
actttggctgttaatgttgatgatgcaatggatgacattgttcgacaatttaaaggagtt
tcagatggtttgaaacgggcggttggcacatcaccttctagtgcaactgcagaattcata
gataatagaatgtatctaccttggaaccaagaagagacagataaccacaacgtgcatcat
aaaaacttggaaagggttcatagcctttctgacggtgatagtaactacgaagatctcacc
tcatctgtaaatagtggatgccactcagacaatgaggtgaataataaaggacatacttca
aatgatattaagcaaattgaaacgcacgccagttttgattcacaaatgagcgaacaaata
caaaaacctgtgagagcatattctgattcttcaaacatgtcgtctccgaatacattcgag
gatccaacaggaattcctcctgagtggatgccaacaaatgttagcgtgcctttattgaac
ctggttgagaaggtattccagctaaagcggcggggttggatacggagacaagttctttgg
atatctaaacaaattttgcagttggtcatggaagatgcaatcgatgaatggattataaga
caaatcaactggctccgaagagaggatttcattgttcaagtaatacgttggattcaagat
accctttggcctaatggtatattcttcaccaagttggacggttacaaagggaatggcggt
ggctcaagtcaatttgacaagcagtcatctgggactgggagtggcaagaagagtggtgca
agctcatttgaatttcagctcgaggcatctagaaatgccagtgaagttaagaaacttctt
ttagatggaaccccgtctaccttagtcagcataattgggtacaagcagtaccgacgtagt
gcaagggacatgtactacttcctccaatctaatgtctgcgttaagcagctctcgtacgca
atgttagaacaagtgatcgtgacaatcttcccagagcttcgtcagctaatcaatgacatc
cacgagaagggccgcaaggagcaagcctcattcacacaccatctctga
DBGET
integrated database retrieval system
