KEGG   Panicum virgatum (switchgrass): 120684641
Entry
120684641         CDS       T07260                                 
Name
(RefSeq) uncharacterized protein LOC120684641
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120684641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120684641
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     120684641
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 120684641
NCBI-ProteinID: XP_039822459
LinkDB
Position
8N:44964075..44967549
AA seq 485 aa
MADLQTLATPGPASASTKKHSKKRKGVEGEANSSKTPEPSPLADLQTDTPVCASTKKHSK
KKRAAADASPNVTPTVDATLKVTIDASRTGDRTAAAAPAVAYFPTGYDPLAAAAAAKDES
APNARLFRHEKHPTWVDLVVRSPGGGPDFVGRSYAGEAATPQLCEYALGVLDKASGTLRI
VPIAANKILRLEPHLEVQQPAHSQHSEVTSEVGSVAGNDELKVQDLTMMYGAKRDRDTDN
KWRSLNEQRNDLSAYEDIDLGASNVNTNDRQELIVRNIPPYDPTADTSENVYLLDEIIPK
TIRHHLLEIVDHFESGEISSKGYGTFVSNRVQKLEKLQGEDKERLAWILSYIQHLLSLLA
RNGTMSKRHYKDRKESKANHGPVTPQAVYRNLLLNFVEPGSNAMSSEKEELLINYILVLA
LFADDFRSDPKDICVDLKKTRQMIKPYYDQLGCKSVSSGAFNPTFMTLPAPLKFPQDVTR
RKRRR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggcggacctccaaaccctagccacgcccggccccgcctccgcctccaccaagaagcat
tccaagaagcgcaagggcgtcgaaggtgaggccaattcctccaaaaccccagagccgtca
ccattggcggacctccaaaccgacacacccgtctgcgcttccacgaagaagcactccaag
aagaagcgtgcggctgccgacgcctcccccaacgtcacacccaccgtcgacgccactctc
aaagtcaccatcgacgcctcccgcacaggcgaccgaaccgccgccgcggcccccgcagtc
gcttacttccccaccggctatgacccactcgccgccgcggcggcggcgaaagatgagtcc
gcccccaacgcgcggctcttccggcacgagaagcatcccacctgggtcgacctcgtggtc
agaagccccggcggaggccccgatttcgtcggccggagctatgccggcgaggccgccacg
ccgcagctctgcgagtacgcgctcggtgtcctcgataaggcctccggcaccctcaggatc
gtccccatagccgccaacaaaattttgaggctcgagccacatctcgaagtgcagcaacca
gcacattcacagcactctgaggtgacatcagaagtcggttcagttgcaggaaatgatgaa
ttgaaggttcaagatcttaccatgatgtatggagccaaaagagacagggatacggataat
aagtggaggtcattaaatgaacaaaggaatgatctttctgcttatgaggacattgacctg
ggagccagtaatgtcaacaccaatgacaggcaggaactaattgttcggaacattccacct
tatgaccctacagcagatacatcagaaaatgtgtatcttttggatgagattattccaaag
actattcggcaccaccttttagaaattgttgaccattttgaatcaggagaaatttcttca
aaaggctatgggacgtttgtctcaaatcgtgtgcagaagttagagaagcttcagggtgaa
gataaagagagacttgcttggatactatcctacatccaacatctactatctttattggca
cggaatggcaccatgtccaagcgtcactataaggacagaaaggaaagcaaggcgaaccat
ggtccagtgacccctcaggctgtatatcgcaacctgttgctgaattttgtagaaccaggg
tctaatgcaatgtcatcagaaaaagaggagctcctgatcaactacatcttggtccttgca
ctttttgctgatgacttcagatccgatcctaaggatatatgtgtggacctgaaaaagacc
cgccagatgattaaaccatactatgaccagctgggatgcaaatctgtgtcatcaggtgct
ttcaatcccactttcatgacgcttcctgcccctctgaagttcccacaagatgttacaagg
agaaagcgacggcggtaa

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