Panicum virgatum (switchgrass): 120684958
Help
Entry
120684958 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 22 homolog 1-like
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120684958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120684958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120684958
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120684958
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120684958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
Exo70_C
Motif
Other DBs
NCBI-GeneID:
120684958
NCBI-ProteinID:
XP_039822745
LinkDB
All DBs
Position
2K:53093479..53097275
Genome browser
AA seq
251 aa
AA seq
DB search
MRRRPGIAGLQNAVATRDQFRLVGENVAKVRTDVMKEQLATFRSQLEEFARKHKSDIRKN
PIFRQQFHEMCAKVGVDPLASNKGVWAELLGIGDFYYELGVQIVDICIATRSHNGGLIDL
LDLRKLLCQKRKATLESLSEDDCLRAISKLKVLGSGFEVISVGRRKLVRSVPTELNKDHS
GILGLAQAEGYVTVEQVEKEFSWSTGRAIDALETLLKEGLAMIDDGHRDGKRRYWFPCVT
VSSDTTSSEAK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggcggccggggatcgctggcttgcagaatgcagtggcaactcgcgaccaattc
cggctggtgggggagaatgtggccaaggtcaggactgatgtgatgaaggagcaacttgcg
acgttcaggtcacagctcgaggaatttgctcgtaagcataagagcgacatccgtaaaaat
ccgatatttagacagcagttccatgagatgtgtgcaaaagttggagtagatccgctggca
tctaataaaggagtttgggcagaacttctagggattggtgacttctactatgaacttgga
gttcagatagttgacatatgcattgcaactagatcgcataatggtggcctgattgacttg
ctagatctccgcaaacttctctgtcagaagagaaaagctactcttgaatcattatctgaa
gatgactgtttacgtgctataagtaagctaaaagtccttggtagtggctttgaagtaatt
tctgtcgggaggagaaagcttgtgcggtcagttcctactgaattaaataaagatcacagt
gggatactagggctagcacaggctgaaggctatgtcacagtagaacaagttgaaaaggaa
ttctcatggtctactggtcgtgcgattgatgcccttgaaactttactcaaggagggactt
gctatgatcgacgatggccacagggatggcaagcgtagatattggttcccatgtgtcact
gtcagttcggacacaaccagcagtgaagccaagtaa
DBGET
integrated database retrieval system
