Panicum virgatum (switchgrass): 120685101
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Entry
120685101 CDS
T07260
Name
(RefSeq) EIN3-binding F-box protein 1-like isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120685101
04075 Plant hormone signal transduction
120685101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120685101
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120685101
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
F-box-like
F-box
F-box_5
LRR_R13L1-DRL21
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120685101
NCBI-ProteinID:
XP_039822875
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Position
2K:complement(53204370..53207716)
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AA seq
564 aa
AA seq
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MYQSRVLQQDLINMLPEACIAEIFRHLENSKDRESCASVCWRWADILVSQQPDFWSPFSV
HQAVHRCLHLSDVDDAKLVEAVVGIHSRGVVTDLDLHNGPREAVFAGGPQLTDTAIRFVT
TACRNLKSVCLVNCLSLTNKAAWIIASNCPALENLVILQSSISDDGLSQVAKQCRNLKSL
RIEGSLSITEASLKALVQDARRLESLALGSYPQIREDAILTLLMNQPYLDKLELKGMMAG
ESHWIGARQSSALNRHFRLFRQLSSLILVKCPGLQDLGMLKFARIQFRMLRHLVIDDCRV
TDRGLIWLVGDAMNPMKLKTIKLARFQFYTAAAAMKVISFVCETIESIILDSCDFGIMTP
LHLDGAVARWCPKLRVLRMEHCEKIMYLFLSWVDKACRGLKEIRLIGSPAPVDDHGIAGR
LSSILHRNRIAKIEMRSCHVTDMHVCIIARSSLEALQELILDECPKISGNFTVFLRAHCP
NLIKLGLNRVQINDGDIKSLMVAGFEHLEELNLMGCPLITKNVLRILATSSLPKLRRVNL
SDCPNVMQETIDSYGRYCGWEIEN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtcaagagttcttcagcaggatttgataaacatgctaccagaagcttgcata
gctgaaatattcagacatctggaaaacagtaaagatcgggaatcatgcgcctctgtctgc
tggagatgggccgatatattggtctctcagcaaccagatttttggagccccttcagtgtt
catcaagctgttcaccgttgcttgcacctgtctgatgttgatgatgccaagcttgtggaa
gctgttgttggcatacactcaaggggtgtggtgactgatcttgatcttcataatggacca
cgcgaggctgtttttgctggtggtcctcagctcactgatactgctattcgttttgtaacc
actgcatgccgtaacctgaagtcagtttgtctcgtcaactgcttatctctcacaaacaaa
gctgcatggatcattgcttcaaactgccctgcattagaaaatctcgtgattttacagtct
tcaatcagtgacgatggtctttcacaggttgctaagcaatgcagaaacttaaagtccctc
cgtattgaagggagcttgtccatcactgaggcatcactaaaagccctagtgcaggatgcc
aggagacttgagtctcttgctctgggaagctatcctcaaattcgagaagacgccatcttg
accttactgatgaaccaaccttatctagacaagcttgagctcaagggcatgatggctgga
gagtcacattggattggtgcaagacaatcatcagccctcaataggcattttcgcttgttt
cgccagctctctagtctcatcctggtgaagtgcccaggtttacaggacctgggcatgctc
aagtttgctagaattcagtttcgaatgctacggcatttggtgattgatgactgcagagtg
acagaccggggcctgatatggctggtgggtgatgccatgaatcccatgaagcttaagacc
attaaacttgccaggttccaattttatacagctgcagctgcaatgaaagtaatatccttt
gtctgcgaaacaattgaatcaataattctggattcatgtgattttggcataatgacgcca
cttcatcttgatggagctgtggcccggtggtgtccgaagctgagggtcctcagaatggag
cactgtgagaaaattatgtacctcttcttgtcatgggtcgacaaagcctgccgtgggctg
aaggagattaggctcattggatctccagcacctgttgatgaccatggtatcgcaggccgt
ctaagcagcatcctgcaccgcaataggatcgcaaagattgaaatgaggtcctgccatgtt
acagacatgcatgtttgcattattgcacgttcctccctggaagctctgcaggaactcatc
ctggatgaatgcccaaagatctcaggcaactttacggtgtttctcagagcgcattgcccc
aatctgatcaagctgggtttgaatcgtgttcaaatcaacgacggcgacattaagagcctc
atggttgcaggatttgagcaccttgaggagcttaatctaatggggtgccctttgatcacc
aagaatgttctacgtatcttagccacatcatccttgcccaagcttaggagagtgaatttg
tcagactgccctaatgtcatgcaggagaccattgacagctacgggcgctactgtggctgg
gagatcgagaactaa
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