Panicum virgatum (switchgrass): 120685134
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Entry
120685134 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120685134
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120685134
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GFIT
Motif
Pfam:
BTB
MATH_2
BACK_BPM_SPOP
MATH
VLPT
BTB_2
Motif
Other DBs
NCBI-GeneID:
120685134
NCBI-ProteinID:
XP_039822900
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Position
8N:45413979..45415004
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AA seq
341 aa
AA seq
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MATSPAASSATAAAVVAGGSTATTITETIAGSYVFRIDGFSGTKDLGVGKSIKSSTFRVG
GHAWYIDCYPCGELEEDNAGWVTLYLYLDHPGPNDKVEAECSFTVMGSAGDPFQETTEKH
VFKSGDTSAGLSIERKELESLLRDDDCFQLRCVVCIFKEFPAVPPPDLHRHLGDLLASRV
GGDVTFEVGGELFTAHRYILSARSSVFTAELFDPSKEAATAARIRIDDMEPKVFRALLHF
IYADSVNVVEDDDDKVMLHQHLLVAADRYNLERLKLICEEMLCNCIDASMAATTLLLASK
HGCQRLKKACSTFLTDLLASVQEPDQQSCHRAPLTGKRQRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcgccagctgcgtcgtcagccacagccgcggccgtcgtcgccggcggctcc
acggctaccaccatcaccgagacgatcgccgggtcgtacgtgttcaggatcgacggcttc
tccggaaccaaggatctcggcgtcggcaagagcatcaaatcaagtacgttccgcgtcggc
gggcatgcctggtacatcgactgctatccttgcggtgagttggaagaagacaacgccggt
tgggtaaccctatatctgtacctcgatcaccctggtcctaacgacaaagtcgaggcagaa
tgctctttcactgtgatgggcagtgctggagatccattccaagaaaccactgaaaaacac
gtcttcaagagtggagatacatcagcaggcctatccatcgaaagaaaggagttggagtcg
ctcctcagggacgacgactgtttccagctcagatgtgttgtgtgcatcttcaaggagttc
cccgcggtgccgcctccggacctgcaccggcacctcggcgacctcctagccagccgagtg
ggaggggatgtgaccttcgaggttggtggcgagctcttcacggcgcaccggtacatcctc
tccgcccgatcctcggtcttcacagcggagctcttcgatccgtcgaaggaggctgccacg
gctgctcgcatacggatcgacgacatggaacccaaagtgttcagagctttgctccatttc
atctacgccgactcggtgaatgtcgttgaagatgatgatgacaaggtgatgttgcatcag
catctgcttgtggcggcggacaggtacaacttggagcggttgaagttgatttgtgaggaa
atgttgtgcaactgcatcgacgcgagcatggctgcaactactttgctgctcgcaagcaag
catggttgtcaaaggctcaagaaggcatgctctacgttcctgacggacctgctcgccagt
gttcaggaacctgatcagcagagttgccacagagcgcctttgactggaaagaggcaaaga
tcctag
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