Panicum virgatum (switchgrass): 120685146
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Entry
120685146 CDS
T07260
Name
(RefSeq) endoglucanase 23-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120685146
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120685146
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120685146
NCBI-ProteinID:
XP_039822913
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Position
2K:53232429..53235513
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AA seq
521 aa
AA seq
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MAPRVAPRPSSTHRLCVRILLASFLAAHRLVPSCSASFFSFFPAAARRHDYRDALAKSIL
FFEGQRSGRLPPGQRASWRGDSGVSDGAAAGVDLEGGYYDAGDNVKFGFPMAFTTTMLAW
SVVEFGGDMPRDERRHAAGAVRWATDYLLKTLAHPGVIFLQVGDPWKDHDCWERPEDMDT
ERTVYNVSAGRPGSDIAGETAAALAAASMVFRDDDREYAETLLASARKAFEFADTYKGAY
SDDPDLRAGGCPFYCDFNGYQDELLWGAAWLRRASKDDTFLQYIQNNGKTLGAEDSSNEF
GWDNKHTGLNVLVSKEFIEGEVLSLQSYKEFADSFICTLIPESSSPHITYTPGGMLYKPG
GSNMQHVTSISFLLLTYAKYLSKSCHTVNCGDISVGPATLQRQAKKQVDYLLGDNPMKMS
YMIGYGDRYPQRIHHRGSSLPSIKDHPQRIACKEGTPYYNSSGANPNPLVGAVVGGPGED
DAYEDDRADFRKSEPTTYINAPLVGVLAFLVGNPNPGHIRH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtcgctccccgcccgtcctccacccaccgcttgtgcgtgcgcatccta
ctagcgtccttcctggcggcgcaccggctcgtgccgtcctgctcggcctcgttcttcagc
ttcttccccgcggccgccaggcggcacgactaccgtgacgcgctggccaagtccatcctc
ttcttcgagggccagcgctcggggcggctcccgccgggccaacgcgcgtcgtggcgcggg
gactccggcgtgtcggacggcgccgcagccggggtcgacctcgagggcggctactacgac
gccggcgacaacgtcaagttcggcttccccatggcgttcaccaccaccatgctggcctgg
agcgtcgtcgagttcggcggcgacatgccgcgcgatgagcgccgccacgccgccggcgcc
gtccgctgggccaccgactacctcctcaagaccctcgcccaccccggcgtcatcttcctg
caggtgggcgatccgtggaaggatcacgactgctgggagaggccggaggacatggacacg
gagcgcacggtgtacaacgtcagcgcggggcggccgggctcggacatcgcgggggagacg
gcggcggcattggcggcggcgtccatggtgttccgagacgacgaccgggagtacgccgag
acgctgctcgcgagcgcgaggaaggcgttcgagttcgcggacacgtacaagggcgcgtac
agcgacgacccagacctcagggcagggggctgcccgttctactgcgacttcaatggctac
caggacgagctactctggggggcggcatggctaaggagagcctccaaggacgacacattc
ctccagtacattcagaacaacggcaagaccctcggtgcagaagacagcagcaacgagttc
gggtgggacaacaagcataccggcctcaatgttcttgtctccaaggagttcatagaaggc
gaggtgctgtctttacagtcctacaaggagtttgcagacagcttcatctgcacgctcatt
ccagagtcctcttcaccacacatcacgtacacccccgggggcatgctctacaagcctgga
ggcagcaacatgcagcatgtcacctccatctccttccttctcctgacgtatgccaagtac
ctctccaagtcatgtcacactgtcaactgcggagacatttcagttggccctgcaactctt
cagcggcaagccaaaaagcaggttgattatctgttaggagacaacccgatgaagatgtca
tacatgattgggtacggcgaccgatacccccaacggatccatcaccgaggatcatcgctg
ccttcgatcaaggaccatccacagcggattgcgtgcaaagaaggcaccccgtattacaat
tcgtccggcgcaaaccctaatccgttggtcggagcggttgtgggagggccaggggaggat
gacgcctatgaggatgaccgtgcggatttcaggaaatctgaacccaccacctatatcaac
gctccgttagtaggagtgctggcattcctcgttggcaaccctaaccctggtcatatcaga
cattga
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