Panicum virgatum (switchgrass): 120685238
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Entry
120685238 CDS
T07260
Name
(RefSeq) scarecrow-like protein 33
KO
K27753
GRAS family protein LISCL
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120685238
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120685238
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120685238
NCBI-ProteinID:
XP_039822983
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Position
8N:50634071..50635698
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AA seq
502 aa
AA seq
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TLSSAFSKGEDAVGAFLKSIDEASRFLPRDNGIRKDQPVNQECGNHRVIKKRYNSDQQLE
REVCRASEAMMMMEELGEMFDKMMLRGYETCIKDMEKLRSAKADEAMNNKKGGSKMRTDV
VDLCALLIRCAQAVAAGSVMTAQELLKQIKQNASSTGDDTQRLAQCFSKGLEARLAGTGS
QLWQSLTAEGPLVIEYLKAYKLYMAACCFNRVALFFNIMTIEHAMAGKSKLHIVDYGPHH
GFQWAGLLRWMANREGGPPEVKITAISRLQPRSCPSEGIEDTGHRLSKCAREFGVPFKFH
SITARWETICNDNLKTDPDEVFIVIDLFNFSILMDESIYFDNPSPRDTVLNNIRKMRPDV
FIQGVVNSSYGTSFLARFREALFHYSALFDMFDATIPRECKLRSVLEQGMLGHTVLNVIA
CEGVDLVNRPERYRQWQVRNQRAGLRQLPLKPNIVKVLKEKVMKDHHKDFFVGEDGQWLL
QGWKGRILYAHSTWVAEDAISE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
actctcagctcagccttctccaagggtgaggatgcagtgggcgcattcttgaagagcatt
gatgaggcaagcaggtttttgccgagagacaatggcattagaaaggaccagccggtgaac
caagaatgtggcaatcatagggtaatcaagaagaggtataacagcgaccagcagcttgag
agggaggtatgcagggccagcgaagctatgatgatgatggaagagcttggagagatgttc
gataaaatgatgctgcgcgggtatgaaacatgcatcaaggacatggagaagctgcgcagc
gccaaggctgatgaggcaatgaacaataagaagggtggtagcaagatgaggactgatgtg
gtggatctatgtgcattgttgatacgttgtgcgcaggcggtggctgcaggcagtgtcatg
accgcacaggagctactgaagcagataaagcagaatgcgtcatcaacaggggatgacaca
caacgactagctcaatgtttctccaaggggctggaggcacgtctagcaggcacagggagc
caactttggcaatcgctgacggcagaggggcccttggtcatagagtacctaaaggcctac
aagctttacatggcagcctgctgcttcaacagggtggccctctttttcaacattatgacc
attgagcatgccatggcagggaagagcaagctccacattgtagactacggtccccaccat
gggttccagtgggcaggcttgctccgctggatggcaaatagggaaggtggcccaccagag
gtgaagataactgctataagccgcctccagccgaggtcctgtccatcagaggggattgag
gatacagggcaccggcttagcaagtgtgcacgtgagtttggtgtgccattcaagttccat
tccatcaccgcaaggtgggagacaatttgcaacgacaacttgaaaacggatcctgacgag
gtttttatcgtgattgacctctttaatttcagtatcttgatggatgagagtatctacttt
gataacccgagcccccgggatactgtcctcaataacatcaggaagatgcgacctgatgtc
ttcatccagggtgttgtcaatagctcatatggcacctccttcctagcacgttttcgggag
gctctgttccattatagtgcgctttttgacatgttcgatgcaactatcccaagggagtgt
aaactgcggtcagtgctcgaacagggcatgttagggcacactgtgctgaatgtcattgcc
tgtgagggtgtggacctggtgaaccgtcctgagaggtatagacaatggcaggtgaggaac
cagcgggcaggcctgaggcagctgccactgaaaccaaacatagttaaggtactgaaagag
aaggtgatgaaggaccatcataaggacttttttgttggcgaggatggccagtggttgctg
caagggtggaaggggcgtatcctttatgcccattctacatgggttgctgaagacgccatt
tctgaatga
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