Panicum virgatum (switchgrass): 120685276
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Entry
120685276 CDS
T07260
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120685276
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120685276
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120685276
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120685276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
GvpG
Motif
Other DBs
NCBI-GeneID:
120685276
NCBI-ProteinID:
XP_039823038
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Position
2K:complement(53381500..53390172)
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AA seq
682 aa
AA seq
DB search
MPTPKQRLPYSTAGGGGGGRRGASGSGVLPPVVVLVFLFVVAPSLFFVVRSGGRGHVHVA
SDPKVRNGDQEAVAMMNLKSILPKEVIDAIAASQQEAGTLSLDFFRNHESPSWKTDDLVT
DNGMYADDKAKAENSAAEHDLPTNKSPKDLDGHQVDTAAKIARRKLREKRREKRAMDLLS
KDDEARVKLENAAIERSKAVDSAVLGKYSIWRKENENENSDTTVRLIRDQIIMARVYSAL
AKSKNKSGLFQELQTRIKESQRAVGEAAADADLHHSAPEKIRAMGQVLSKAREEVYDCRA
ITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNSIHCLSMQLTIDYYLLPLEKRKFP
RSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLL
NPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNP
KYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESFH
RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNKNEDRVLWKL
GTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDGAAVVHYNGNMKPWLELAMTKY
RPYWTKYIKYDHPYIRGCNLSE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccgaagcagcggctcccctactccaccgccggcgggggcggaggggggagg
cgcggcgcctccggctccggcgtgctgccccccgtggtggtcctcgtgttcctcttcgtg
gtcgcgccttcgctcttcttcgtcgtgcgcagtggaggccgcggccacgtccacgtcgcc
tccgaccccaaggttaggaatggcgatcaggaagcagtggcaatgatgaatctaaaatct
attttgccaaaggaggtgattgatgctatagctgctagtcaacaagaagcaggcacattg
agtctcgacttttttaggaatcatgaatctccctcttggaaaactgatgatctagtcact
gacaatggtatgtatgccgatgacaaggctaaagctgaaaacagtgcagcagaacatgat
ttaccaacaaataaatcacccaaagatctagatggacatcaagttgacacagcagcaaaa
atagctcgaaggaaactaagggagaagaggcgtgagaagagagcaatggatttgctgagt
aaagatgatgaagcgcgtgttaagctggagaatgctgctattgagcgatcaaaggctgtc
gattctgctgtgcttgggaaatatagcatatggaggaaagagaatgagaatgagaattca
gacactacagttaggttgataagggaccaaattatcatggctcgtgtctattctgcgctt
gctaaatcaaagaacaagagtggtctatttcaagaactgcagacccgaatcaaggaaagc
cagcgggctgttggagaggctgctgctgatgctgacctgcatcacagcgctcctgagaaa
atcagagcaatgggtcaagttttatcaaaggctagagaagaagtgtacgattgcagagct
ataactcagagactgagggctatgcttcagtcagctgatgaacaggtcaggagcttgaag
aagcagagtacatttcttagccagctggctgcaaagacaattccaaatagcattcactgc
ttgtctatgcaactgacaattgattactatctcctccccctggagaaacggaaattccca
aggagtgagaacttagaaaacccaagtctctaccactatgcacttttctcagacaacgtc
ttggcagcttctgttgttgtgaactcgaccatcatgaatgccaaggaaccagagaaacat
gttttccatcttgtgactgataagttaaactttggagccatgaacatgtggtttctgctg
aacccaccgggcaaggccaccatccatgttgagaatgtggacgaatttaagtggttgaac
tcatcatactgtcctgtgctgcggcaacttgagtctgctgccatgaaagagtactatttc
aaagctgatcgccccaccactctctcagcaggttcttcaaatctaaagtatcggaacccc
aagtacctctctatgctgaaccacttgaggttttatctcccagaggtctatccaaagttg
gataagatacttttcctcgatgatgacatagttgtgcagaaagatttgacagggttgtgg
gatgttgatcttaatggaaaggtcaatggtgctgtggaaacctgtggggagagtttccac
cgttttgacaagtaccttaatttttcaaatccacatattgctcggaactttgatccaaat
gcatgcggctgggcttatgggatgaacatctttgaccttaaggagtggaagaagaaagat
attactgggatctaccacaaatggcaaaacaagaatgaagacagagttctttggaagctt
gggacacttccgcctggcctcttgaccttctacaaattgacgcatcccctggataagtcc
tggcacgttcttggattgggatacaacccaagcatagaccgttcggagatagacggtgct
gctgttgttcattacaatgggaacatgaagccatggttggagctggcaatgaccaagtac
cgaccatattggaccaagtatatcaagtatgatcacccttacatccgtggatgcaacttg
agtgagtag
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