Panicum virgatum (switchgrass): 120685297
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Entry
120685297 CDS
T07260
Name
(RefSeq) two-component response regulator-like PRR95
KO
K12130
pseudo-response regulator 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120685297
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GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120685297
NCBI-ProteinID:
XP_039823065
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Position
2K:complement(53418079..53423103)
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AA seq
625 aa
AA seq
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MGEGAGEAVKVVDLEDGEREEEAAAAGSSRETRMLPRMPVRVLVAEGDDSTRHVISALLR
KCGYRVAAASDGVKAWDILQEKSFNIDLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIM
MSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLANGGPDVQHIQQEENLA
ERIEQKIAVTKVDNLNKDGACKNRECSEQESDAQSSCTRSELEAESKQTNNILEYKQPTK
RQFSIPSHKNGELNGQTKLRSNNLIPTREDYLSPKKKACLNDNNSEKASRDIELVHIIDN
QEKHNMQREEVDTMRTTSTGNDEKGSIPAHQLELSLRRTDYGKLENQEKNDRRMLNHSTS
SAFSLYNCRTASTLGNAGDGQLCSTSETQADVENKNGDSAAPSHDITETNRPIRVVPFPV
PVQGLTFDGQPFWNGTPVASLFYSQSAPPIWNSKTSMWQESTPQATSVQQKSQQNEPNEM
GPKPVQNAEEQSHISHPSSNGKQLRVEIPKDEARHVSPMTGESGTSTVLDSVRNTLSVSG
CDSNSNRIPAPTESSNTFKGVPETPSAEGSRHLSQREAALNKFRLKRKDRCFEKKVRYQS
RKLLAEQRPRVKGQFVRQDHSIQGT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggagcgggtgaggcggtgaaggtggtggatttggaggacggggagcgggag
gaggaggctgcggcggcggggtcgagcagggagacgcggatgctgcccaggatgccggtg
cgggttctggtcgccgagggcgacgactccacgcgccacgtcatctccgcgctgctccgc
aagtgcggctaccgagttgctgcggcctctgacggtgtgaaggcgtgggacatactgcag
gaaaaatcgttcaacatagaccttgttttaactgaagttgaactgcctttgatgtcgggg
ttcctcctgttatccacaatcatggagcatgatgcgtccaagaacatccccgttataatg
atgtcttcgcatgattcagtaagcatggttttcaaatgcatgctcaagggtgcagcagat
ttccttgttaagccgataagaaagaatgagttaaggaacttatggcagcacgtttggaga
aaacaactggcaaacggtgggcctgatgtgcagcatatacagcaagaagagaatcttgca
gaaagaattgaacagaagattgctgtgacaaaagttgataatttaaacaaagatggagcc
tgtaaaaatagagaatgcagtgaacaagagagtgatgctcaaagttcttgcacaagatca
gagttggaggctgaaagtaagcaaacgaacaatattttggagtataagcaaccaactaaa
aggcaattctctattcctagccacaagaacggcgagttaaatggacagaccaaacttaga
agtaataacttgattccaacaagagaagattatttatcaccaaagaaaaaggcatgtttg
aatgataataactctgagaaagcttccagagatattgagctagtccacattattgacaat
caagagaagcataacatgcagagggaggaggtggatactatgagaacaacatctactgga
aatgacgagaagggctccatcccagcacaccagttggaactctctctcagaagaactgac
tatggtaaattagagaaccaggagaaaaatgatagaagaatgctgaaccattctacttcg
tctgcattttccttgtataactgtaggactgcgtccacattaggaaatgctggcgatggt
cagttatgtagcacctcagaaacacaagcggatgtggaaaacaaaaatggagattcggca
gccccctctcatgatattactgaaacaaatcgtcctattagagttgtaccatttcctgtc
cctgttcaaggtctcacatttgatgggcagccattctggaatggtacgccagtggcatcc
ctgttctactcacagtccgctcctcccatttggaatagcaaaacatccatgtggcaagaa
tcaaccccacaagcaacctcagtgcagcagaagtcacaacagaatgagccaaatgaaatg
ggcccaaagccagttcaaaacgcagaggaacaatctcacataagtcatcctagttccaat
gggaagcaactacgtgttgaaattcctaaagatgaggcacggcatgtttctcctatgact
ggtgaaagtggaactagcaccgtgcttgacagcgtcagaaatactctcagtgtcagcggc
tgtgacagcaattccaaccggatccctgcccctactgaatcgtccaacacatttaagggt
gttcctgaaaccccaagtgctgaaggttcacgtcacctgagccagcgagaggctgcactg
aacaaattccggctaaagaggaaggataggtgttttgagaagaaggtccggtaccagagc
aggaaattactcgcagagcagcgcccacgggtcaagggccagtttgttcgtcaagatcat
agcatccaaggaacttag
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