KEGG   Panicum virgatum (switchgrass): 120685302
Entry
120685302         CDS       T07260                                 
Name
(RefSeq) adagio-like protein 3 isoform X1
  KO
K12116  flavin-binding kelch repeat F-box protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120685302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120685302
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120685302
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_4 Beta-prop_ATRN-LZTR1 Kelch_3 Kelch_2 Kelch_5 Kelch_1 PAS_9 Kelch_6 NANM PAS_3 PAS F-box-like F-box PAS_4 PAS_8
Other DBs
NCBI-GeneID: 120685302
NCBI-ProteinID: XP_039823070
LinkDB
Position
8N:complement(38156704..38161186)
AA seq 621 aa
MFDDGVVAVKRMRLWEEDGEEEVEEGEEGMEVDGEEEEGWAWGAPAAGVGEEQRAAAIVV
ADAAEADFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMIVSEIRR
CLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGSVTHVIGIQLFSEANIDLSNISYP
VYKQQSNHRPSIQDLNSASHEHTPKIQSSDYCGIHQLSDEVLAHNILSRLSPRDVASIGS
VCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEISTKMLGWGRLARELTTLEAASWRKFTV
GGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKVSASPPGR
WGHTLSWLNGSCLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEAPPLPRSWHSSCTL
DGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTLSVYGATKLFM
YGGLAKSGSLQLRSSDAYTMDVGEDSPQWRQLATTGFPNVIPPPRLDHVAVSLPCGRIII
FGGSIAGLHSPAQLFLIDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG
EEWILNELHELCLASRPDEDE
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgttcgacgacggcgtggtggcggtgaagcggatgaggctgtgggaggaggacggggag
gaggaggtggaggaaggggaggaggggatggaggtggacggggaggaggaggaggggtgg
gcgtggggggcgccggcggcgggggtcggggaggagcagcgggcggcggcgatcgtggtg
gcggacgcggcggaggccgacttccccgtcatctacgtcaacgccgccttcgaggccgcc
acggggtaccgcgcccacgaggtgctcgggcgcaactgccgtttcctgcaatttcgggat
ccacgtgcgcaaaggcggcatccccttgttgatcccatgattgtgtcagagattcggcga
tgtctcaatgaggggattgaattccaaggcgagctgctcaattttcggaaggatggtgct
ccactttacaatagattaaggctcattcctatgcatggggatgatggctctgtgacacat
gttattgggatccagctattctctgaggcaaacattgatctcagcaacatatcatatcca
gtgtataaacaacagtctaaccacaggcctagcattcaagatctgaactcagcttctcat
gaacatactccaaaaatccagagttcagactactgtggtatccaccaattgtcagacgaa
gttcttgcacacaacattttatctcgcctgtcaccaagagatgtcgcatcgattggatca
gtctgtaccagaatgcatgaactaaccaagaatgatcacctgaggaagatggtctgccag
aacgcttggggaagagatgtcactgtcagacttgagataagcaccaagatgttaggatgg
ggtcgccttgcaagagagctaacaacccttgaggctgcctcatggagaaagtttactgtt
ggaggacgtgtggagccttcccgttgcaacttcagtgcatgtgctgttggtaatcgcctt
gtcctgtttggaggggagggagtcaacatgcagcctatggatgatacgtttgtgcttaac
ttggaggctgcaaggccagaatggcgccgggtcaaggtctctgcctccccacccggccgg
tgggggcacactctgtcatggctgaatgggtcatgtctggtagtatttggaggctgtgga
cagcaaggtttgctcaacgatgtcttcgtccttgaccttgatgctcagcagcctacatgg
agggaggttgccagtgaggctcctccactgccacggtcttggcacagctcatgcactttg
gatggttcaaagctcgttgtctcaggtgggtgcactgaatctggagttcttctcagcgac
accttcctccttgacctcacaaaggaaaaaccagcttggagggagatccctacatcctgg
tctccaccatcccgccttggtcacaccttgtctgtctatggtgcaaccaaactattcatg
tatggtggactggcaaagagcggctctctccagctgcgttccagtgacgcatacacgatg
gatgttggtgaagacagcccccaatggaggcagctggcgacaactggcttcccaaatgtc
attccaccgccaaggcttgatcatgtcgctgtgagcctgccatgtgggagaatcatcata
tttggcggctcgattgctggcctgcactcaccggcacagctgttcctgatcgaccctgct
gaggagaagccgacatggaggatactgaacgtccctgggcagccaccgaagttcgcctgg
ggacacagcacatgtgtggtgggtggaacaagagttctggtcctgggaggccacaccggg
gaggagtggatcctgaatgagctccatgagctttgccttgcaagcaggcctgatgaagat
gagtga

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